Gene Daro_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1886 
Symbol 
ID3569601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2026546 
End bp2027367 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID637680357 
ProductAraC family transcriptional regulator 
Protein accessionYP_285102 
Protein GI71907515 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAG ACCTCAGCTT CGACCCTTTA CCCCGCCGCG CCCCGACCGC CGAGTTGCCG 
ATGACGGTCA ACCTGCGTTG TCCACCGGCC GAGGTTTATG TGCCACCGCA TCGCCATGAC
TGGGCGCAAC TGGCCTATCC GCTGCGCGGC GGCATCCGGA TTTCGGCGGC CGGCATGACC
TGGCTGGTGC CCGCCTTGCG CGCCGTGTGG ATTCCGCCGC ATATCGAGCA CGATCTGCTC
ATGCTCGGCG AAGTCGAATT CCGCACCGTC TATATCGCGC CGGAAGTGGC CCCGCTACCG
CTCGATGCCT GTTCGGTGAT CGAAGTCTCC GACTTGATGC GGGCGCTCTT TGAGGCCCTG
AGCGAGGCTG ACGGCGACGG TCAGGAGCCG TCGCTGCGCC AGCGTCAGGT GACGGCATTG
CTGCTCACCG AAATCCGCCG TGCGCCGCCG CTCTCGCTCG GCCTGCCGAT GCCCCATGAC
CGGCGCCTGC AGGCCTTGTG TCAGGCGCTG ATCGACGAAC CCGCTTCGCC GTTGTCGCTG
GCCGAGTGGG CGGCCCGAGT CGGTGCCAGC GAGCGAACAC TGGCCCGCCT GTTCGTCAGC
GAACTGAAAT TAAGCTTCGG CGCCTGGCGC CAGCAATTGC GCCTAGCGCG AGCGCTCGAC
CTGATTGGCC GCGGCCGCCC GTGCGGCGAA GTCGCGGCAG AACTAGGCTA CGCCAGCCCA
GCCGCCTTCT CGGCCATGTT CAAACGTGCC TTCGGCGTGC CGCCGGGGCG CTTCATGCAG
GAACGTAGTC CCTTGCCCGC CGGCGAACCG CATAACGACT GA
 
Protein sequence
MQTDLSFDPL PRRAPTAELP MTVNLRCPPA EVYVPPHRHD WAQLAYPLRG GIRISAAGMT 
WLVPALRAVW IPPHIEHDLL MLGEVEFRTV YIAPEVAPLP LDACSVIEVS DLMRALFEAL
SEADGDGQEP SLRQRQVTAL LLTEIRRAPP LSLGLPMPHD RRLQALCQAL IDEPASPLSL
AEWAARVGAS ERTLARLFVS ELKLSFGAWR QQLRLARALD LIGRGRPCGE VAAELGYASP
AAFSAMFKRA FGVPPGRFMQ ERSPLPAGEP HND