Gene Daro_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1880 
Symbol 
ID3569595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2022480 
End bp2022893 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID637680351 
Producthypothetical protein 
Protein accessionYP_285096 
Protein GI71907509 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC AGCAGCGCCT CGCCATCACC ACCCGCGGCC GCGGTTCCAT CGAAATCACC 
GATGAAATTG CCGCCGTGGT GCGCAAGGCC AAAGTCGACT CCGGCATCGC CCATATTTTC
GTCCGCCACA CCAGTTGCGG GCTGGCGATC ACTGAAAACG CCGATCCCAG CGTTCGTCGC
GATCTCGAAA TGCTGATGCA GCGCTGGGCA CCTGATGGCG ACCCGGACTA TCGCCACGAC
ATGGAAGGCG ATGACGACAT GGCGGCCCAT GCCCGCTCGC TGCTGACGGG TGTCTCGCTA
AGCGTTCCGT TCGCCGGCGG CAGGCTGCTG CTCGGCACCT GGCAAGGCAT CTACCTGTTC
GAACACCGTA GCCAGGCTCA CCAGCGGGAA ATCGTCGTTA CCCTACTCGG CTAA
 
Protein sequence
MAEQQRLAIT TRGRGSIEIT DEIAAVVRKA KVDSGIAHIF VRHTSCGLAI TENADPSVRR 
DLEMLMQRWA PDGDPDYRHD MEGDDDMAAH ARSLLTGVSL SVPFAGGRLL LGTWQGIYLF
EHRSQAHQRE IVVTLLG