Gene Daro_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1878 
Symbol 
ID3569593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2020355 
End bp2021044 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID637680349 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_285094 
Protein GI71907507 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCC TGCTCGTCGA AGATGACGCC CTGCTGGCCG ATGGTCTGGC CCGAGCTCTG 
CGCCATTCCG GATATATCGT CGACACCGCC AATGACGGCC TGAGTGCCGA TTCCCTGCTG
GCCAATGAGG CCTACGATCT GGTGATTCTC GATATCGGCC TGCCCGGGCT CGATGGTTGT
GAGGTATTGC AGCGCCTGCG CACCCGCCGT CAGCAGACGC CGGTGCTGGT GTTGTCAGCG
CGGCTGGCGG TTGAAGAGCG GGTGCGCCTG CTTGATCTGG GCGCCGATGA TTACGTGGTC
AAACCGGTGA CCCAGGCCGA ACTGGAGGCA CGGGTCAGAG CCCTGATCCG GCGCCGGCTG
GGTGAGGCGT CGCCCGAGGT GGTTCTCGGC AGTCTGCGTC TGGATACGGT GGGCAAGCGG
GCCTGGTTGA ACGATACGGC GCTTGAGTTG AATGCCCGGG AGTGGGCGGC GCTTGAGTTT
CTGGCCGGCC GGGTTAACCG GATCGTCAGC AAGGAACAGT TGATCCAGGC GCTGTATAGC
TGGCAGGATG AAATCACGCC AAACGCCATC GAAAAACTCG TTTCGCGTCT GCGCGTCAAG
CTTGAAGAGG CAGGGATCAC GATCCGCACC GTGCGCGGAC TGGGCTATTA CCTGGAAAAA
CCGGCCGATG CTGCCGCGCG TGACGAGTAG
 
Protein sequence
MHILLVEDDA LLADGLARAL RHSGYIVDTA NDGLSADSLL ANEAYDLVIL DIGLPGLDGC 
EVLQRLRTRR QQTPVLVLSA RLAVEERVRL LDLGADDYVV KPVTQAELEA RVRALIRRRL
GEASPEVVLG SLRLDTVGKR AWLNDTALEL NAREWAALEF LAGRVNRIVS KEQLIQALYS
WQDEITPNAI EKLVSRLRVK LEEAGITIRT VRGLGYYLEK PADAAARDE