| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1876 |
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| Symbol | |
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| ID | 3569591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2017927 |
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| End bp | 2019054 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637680347 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_285092 |
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| Protein GI | 71907505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 0.748539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA CCTCCCCTCT CCTTATCCTG TTGCTGGCCC TGGCCGGCTG CTCGGCCGAA
CCGGAAGCGC AGAAAGCCGC CGCGATCAAG GTGGATGGCG ACCGCGCCCT GCTCGCCGAA
CCGGACAAGG CGACTTTTCT GAAACTGGCC GTCGTCGAAA AGGACAAGGG CGGCCTGCTG
CGCCTGCCCG GCCGGCTGAT CTGGAACGAA GAAAAAACGG TCCGCGTCTT CCCGCAACTG
GGGGGCCGCG TGCAGGGCAT CGCCGTCGAT GTCGGCGCGA CAGTCAAGAT CGGCCAGCCG
CTGGCCACCC TGAGTTCGCC GGAATATGGC CAGGCGCTGG CTGATGCCCG CAAGGCCCGG
GCCGATGCCC AGGTCGCCAC TCAGGGCCTG GAGCGCAATC GCGTTCTGCG CGAAGCCGGT
GTTGTCGCCG AAAAGGATTG GCAGCAGGCT GAAGCCACGG CCATCGCCGC CAAGGCCGAA
GCCGAACGGG CGACCCGTCG CCTGGCTGGC CTCGGTGGTG AAGGCGATGG CACCTATGTG
CTGCGTACGC CGCTGGCGGG CGTGGTCGTC GAACGCAACC TGAATCCGGG CATGGAGTTC
CGCCCCGATC AGTCCGGAGC GCCGCTGTTC GTCGTCACCG ATCCGTCCAG CCTGTGGGTT
CAGGTTGATG CTGGCGAAGC CGACCTGGCC AAGCTGAAAA AGGGCGAGCC GCTGCTGATT
GAATCGAAGC AATATCCTGG CGAGCGCTTC AAGGGCGTCA TTCGCCACGT CGCCGATTTC
GTCGACCCGA ATACGCGGAC GATCAAGGTC CGTGGCGAAG TGCCGAATGC CGACCGGCGC
CTGAAGGGCG AGATGTTCGT CAATGCCCTG GTCGAACTGG CCCCGACGCC TGCCCTGCGC
GCACCGGCCA CCGCCGTCTT CCTGTTCGGC AACAAACGCT ATGTGTTCGT GGAGGAAGTG
CCCGGGCGCT ATCGTCGACA GCTGGTTGAA GCCGGCGCCG AGCGCGATGG CCTGATCGAC
CTGATGTCAG GCGTCAATGA GGGCGACAAA GTCGTCACCG AAGGCAGCCT GCACCTGCTG
AAATACTTCA AGCCGGCCGC AGCCGCTGAA AAACAGGCAG CCAAATGA
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| Protein sequence | MKLTSPLLIL LLALAGCSAE PEAQKAAAIK VDGDRALLAE PDKATFLKLA VVEKDKGGLL
RLPGRLIWNE EKTVRVFPQL GGRVQGIAVD VGATVKIGQP LATLSSPEYG QALADARKAR
ADAQVATQGL ERNRVLREAG VVAEKDWQQA EATAIAAKAE AERATRRLAG LGGEGDGTYV
LRTPLAGVVV ERNLNPGMEF RPDQSGAPLF VVTDPSSLWV QVDAGEADLA KLKKGEPLLI
ESKQYPGERF KGVIRHVADF VDPNTRTIKV RGEVPNADRR LKGEMFVNAL VELAPTPALR
APATAVFLFG NKRYVFVEEV PGRYRRQLVE AGAERDGLID LMSGVNEGDK VVTEGSLHLL
KYFKPAAAAE KQAAK
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