| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1875 |
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| Symbol | |
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| ID | 3569590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2014841 |
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| End bp | 2017930 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680346 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_285091 |
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| Protein GI | 71907504 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.66936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGC GCATTGTTCA TTTCGCGCTC AATCAGCCGC TGTTCATCAT TCTCGGACTG
GTGCTGTTCA TCGGCATCGG TGTTGCCTCT TTTCGCTCGC TGCCGATCGA AGCTTTCCCG
GATGTGACCG ATACCCAGGT CACCATCATC TCGCTCTATC CTGGCCGCGC CCCGGAAGAA
GTCGAGAAAC AGGTCACCAT TCCGCTTGAA ATCGCGCTGG CCGGCGTGCC CAATTCGATC
CGGATGTTCT CGCACACCCA GTTCGGGCTG TCTTTCATCG TTGTCACCTT CGACGAAAAA
CCCAGCCTGT TCATGGCACG GCAACTGGTG CAAGAACGTT TGCGCGGTAT CGACCTGCCC
CCTGGCGTCG AGCCGGAACT CGCCCCGCCG GCCACCGCCA CCGGTGAGAT TTTCCGCTAT
CGTCTGGAAG CCCCGAGCCT GAAACCGAGC GAGATTCGCG CCATCCAAGA CTGGACGGTC
GTCCGCCAGA TCAAGCAGGT TTCCGGCATC GCCGATGTCG TCTCGCTGGG TGGGCCGATC
CGCCAATACG AGGTGCGCCC CAACCTGCCC AAGCTGCGCG ACTACAAGAT CACCCTCGGC
CAGTTGTTCA ATTCGCTGCA ACGCGCTAAC GCCAACGCCG GCGGCGGTTC GGTGGCGCAG
GGTCGCCAGC AATTCCTGAT CCGCTCGCTT GGCCTGCTGC ATTCCTCGGC CGATATAGGC
CAGGTTGTCG TCGCTGAAAA CAACGGTACC CCTATCCTGG TTCGGGACAT TGCCGAAGTC
GTCGAGTCGC GCGTGCCGGA ACAGGGCATC GTCGGCATCA GCGATGCCAA TGGCGACCAG
GACGACGTCG TTTCCGGCAT CGTGCTGCTG CGCAAGGATG AGAATCCTTC CATGGTGCTC
GACGCGCTGA AGACCAAGGT CGATGCGCTG AATGCCGGCG GTTTGCCGCG TGGCGTGCAG
ATCATCCCCT TCTATGACCG TTCCTGGCTG ATCAGCAAGA CGCTGAAGAC CGTCTTCATG
AACCTGCTCG AAGGCGCCCT GCTGGTCACG CTGGTGCTCT ATCTCTTCCT GGCCGATTTC
CGGGCGGCGG CCATTGTCGC CTCGATCATC CCATTGGCCT TGCTCGGCAC CTTCATCGGT
CTTTCGGCAG TGGGCATCCC GGCAAACCTG CTGTCGCTGG GGGCGATGGA CTTCGGCATC
ATCGTCGACG GTGCGGTGAT CGTCATCGAG AATATTTTCC GGCGCCTCGG CGAAGCCAGG
CGCGATGACG ATCACCGGCC CCACACCCGA ACCATCCAGG AGGCTGTGAT CGAAATCGGC
CGGCCAACCG TGTTCTCGAT GATCATCATC ATCGTGGCCC ACCTGCCAAT CTTCACGATG
CAACGGCACG AAGGCAAGAT CTTCGCCCCG ATGGCCTACT CGGTCGTCGC CGCCCTGATC
ACTTCGCTGA TCCTGTCGCT GACGCTGGTT CCCTTCCTAT CCAAAATCGC CTTCAAGAAC
AACGTGCCGC ACGAAGAAAC CAGGCTGATG CACTGGTTCA TGAACAAGTA CGAACCGGCG
CTGAAATGGG TGCTCGCCCA CGCCAAGCGC GTGCTGGCGG CCGCACTGGT GGCGCTGGCC
ATCACCGCGG CCCTGGTGCC GCAGCTGGGT ACCGAGTTCC TGCCCGAACT GAACGAAGGC
TCGATCTGGA TCAATATCAC CCTGCCCACC TCGGTATCCA TCGACGAGGC CAAAGGCGAA
CTGCGCAAGC TGCGCCGCAT CATTGCCGAT TTTCCCGAGG TCAATGCAGT GATTTCCAAG
GGCGGCCGCC CGGAAGATGG CACCGATCCG AAGAACATCA ACATGACCGA AATGCTGGTC
GACCTGAAGC CGGACAATCA ATGGCGCAAA GGGATGACCA AGGAACAGCT GGTGCGCGAC
ATGGAGGACA AGCTGAACGA CATGCCGGGC ATCGAGCCGA CCTTCAGCCA GCCGGTGCGC
GACCAGATTC TCGAATCCAT TTCGCAGATC GACGGCCAGA TCGTGATCAA GCTGTTCGGC
GATGACACCA CTACGCTGAA GCTGCATGCC AACCAATTGC TCGACAAGAT CGGCAATGTG
CCGGGTGTCG TCCGCGCCTT CATCGACCGC GACGGCGACC TGCCACAATA CCGGCTGGAA
ATCGACCGCG CGGCGGCCGC CCGCTATGGC CTGAACGTCA TGGATGTGCA GGATGTCGTC
GAAACAGCAA TGGCCGGCAA GGCAGCCACC GAACTATGGG AAGGCGACCG CCATTTCAGT
GTCGTCGTTC GTCTTGATGA ACCATCGCGT CAGCTCGACA AGCTGAAGGA TGTGCTGGTG
CCTACCCCCT CCGGCGCCCA GATACCGCTG TCGGCCCTGG TCGATTTCAA GATGGGGAGC
GGCGCCATGA ACATCGCCCG CGAATCTGGC CAACGTGTCG TAGCCATCGG CGTCTTCATC
CGCGATCGCG ACATGGGCAG CGTCGTTGCC GACATGCAGA CCCACGCCAA GGACATCAAG
CTGCCCGAGG GTTATTCGAT TACCTGGTCG GGTGAATTCG AGAACCAGGA ACGGGCGATG
AAGCGGCTGA TGCTGGTTGT GCCGCTCTCC ATCCTGATGA TTTTCCTGCT CCTGTTCGAT
GCCTTCGAGT CGTTCAAGGA TGCGCTGATC ATCATCTGCA ATATCCCGTT CGCACTGATC
GGCGGCATCT TCGCGCTACT GATCTCCGGA ATACCGCTGT CGGTTTCGGC CGCCATCGGC
TTCATCGCCC TGTTCGGACA GGCGGTGCTC AACGGGGTGG TAATGGTCAG CTACATCAAC
CAGTTGAAGC AACAGAAGCT CGACGACTAT CAAGCCGTGT TCCAGGGCGC CCTGTCGCGC
CTGCGTACCG TGCTGATGAC TGCCCTGCTC GCCATGCTCG GTCTTCTGCC AATGGCCCTG
TCGCATGGCA TCGGCTCCGA AACACAACGC CCGCTGGCCC TGGTTGTCAT TGGCGGCCTG
ATCACGGCTA CTGTGCTGAC GTTGTTCGTG CTGCCGGCAC TGTATTACTA CGTCGCAACG
CATCCCCGGC TGGCCAAGGC ATTGCACTGA
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| Protein sequence | MIKRIVHFAL NQPLFIILGL VLFIGIGVAS FRSLPIEAFP DVTDTQVTII SLYPGRAPEE
VEKQVTIPLE IALAGVPNSI RMFSHTQFGL SFIVVTFDEK PSLFMARQLV QERLRGIDLP
PGVEPELAPP ATATGEIFRY RLEAPSLKPS EIRAIQDWTV VRQIKQVSGI ADVVSLGGPI
RQYEVRPNLP KLRDYKITLG QLFNSLQRAN ANAGGGSVAQ GRQQFLIRSL GLLHSSADIG
QVVVAENNGT PILVRDIAEV VESRVPEQGI VGISDANGDQ DDVVSGIVLL RKDENPSMVL
DALKTKVDAL NAGGLPRGVQ IIPFYDRSWL ISKTLKTVFM NLLEGALLVT LVLYLFLADF
RAAAIVASII PLALLGTFIG LSAVGIPANL LSLGAMDFGI IVDGAVIVIE NIFRRLGEAR
RDDDHRPHTR TIQEAVIEIG RPTVFSMIII IVAHLPIFTM QRHEGKIFAP MAYSVVAALI
TSLILSLTLV PFLSKIAFKN NVPHEETRLM HWFMNKYEPA LKWVLAHAKR VLAAALVALA
ITAALVPQLG TEFLPELNEG SIWINITLPT SVSIDEAKGE LRKLRRIIAD FPEVNAVISK
GGRPEDGTDP KNINMTEMLV DLKPDNQWRK GMTKEQLVRD MEDKLNDMPG IEPTFSQPVR
DQILESISQI DGQIVIKLFG DDTTTLKLHA NQLLDKIGNV PGVVRAFIDR DGDLPQYRLE
IDRAAAARYG LNVMDVQDVV ETAMAGKAAT ELWEGDRHFS VVVRLDEPSR QLDKLKDVLV
PTPSGAQIPL SALVDFKMGS GAMNIARESG QRVVAIGVFI RDRDMGSVVA DMQTHAKDIK
LPEGYSITWS GEFENQERAM KRLMLVVPLS ILMIFLLLFD AFESFKDALI IICNIPFALI
GGIFALLISG IPLSVSAAIG FIALFGQAVL NGVVMVSYIN QLKQQKLDDY QAVFQGALSR
LRTVLMTALL AMLGLLPMAL SHGIGSETQR PLALVVIGGL ITATVLTLFV LPALYYYVAT
HPRLAKALH
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