| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1864 |
|---|
| Symbol | |
|---|
| ID | 3569560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2003507 |
|---|
| End bp | 2004388 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637680335 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_285080 |
|---|
| Protein GI | 71907493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.00450091 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC AAACCACGCC TCTCCAATTA ATCAATCGCC GACGCTTGCT GGGCGCCAGC
CTGCTGCTGC TCGGCGGCTG CGCCAGTTTC CAGTCGGCCA AACCCGTTGC GCCGGCGCGG
CCCAAGGTCG GCCTCGCCCT GGGTGGTGGC GCGGCACGCG GTTTCGCCCA TATCGGCGTG
ATCAAGATGC TCGAATCGCA CGGCATCTAT CCCGACTACG TGGTCGGCAC CAGTGCCGGG
GCCGTCGTCG GCTCGCTCTA CGCGGCCGGC TACGACGCCT TTGCCATGCA GAAAATTGCC
CAGCAACTCG ACGAAAAGAT CTTCGCCGAC TGGACGCTGG GCGGGCGCGG CCTGCTCAAG
GGAGAAGCCC TGCAGGAGTT CATCAATCAG CACCTGAACA AACGGCCGCT GGAAAAGCTG
AACCGGCCCT TCGCCACCGT CGCCACCGAT CTCAACAGCG GCGAGCGCGT CGTCTTCCGG
ACTGGCGACA GCGGCATGGC CGTACGTGCT TCTGCCTCTG TACCCGGGGT TTTCCAGCCC
ACGCAGTTTC GTGGCAGGAG CTACGTCGAC GGGGGGCTGA CCAGTCCGAT TCCGGTGCAG
GCAGCGCGCG AAATGGGCGC CGACATCGTG ATTGCGGTCG ATATATCCTC CAGACCGGAA
GGCCAGCCGG TCGATAGCAT GACCGCAATC ATCTGGCAGA CGACGACCAT CATGGGTGGC
GCAATCGGCG CCAATGAGCT GCGCGGCGCC GACATCGTCA TCCGCCCGAA GCTGCCCTAT
GTCAAGTCCT GGGACTTCAC GGCCCGCAAC GACGCCATGC TCGAAGGCGA GCGGGCCGCA
CAGGCGGCCC TGCCCGCGAT CAAGCAGAAA CTTGGGCGTT GA
|
|---|
| Protein sequence | MPDQTTPLQL INRRRLLGAS LLLLGGCASF QSAKPVAPAR PKVGLALGGG AARGFAHIGV
IKMLESHGIY PDYVVGTSAG AVVGSLYAAG YDAFAMQKIA QQLDEKIFAD WTLGGRGLLK
GEALQEFINQ HLNKRPLEKL NRPFATVATD LNSGERVVFR TGDSGMAVRA SASVPGVFQP
TQFRGRSYVD GGLTSPIPVQ AAREMGADIV IAVDISSRPE GQPVDSMTAI IWQTTTIMGG
AIGANELRGA DIVIRPKLPY VKSWDFTARN DAMLEGERAA QAALPAIKQK LGR
|
|---|
| |