| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1850 |
|---|
| Symbol | |
|---|
| ID | 3570098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1985806 |
|---|
| End bp | 1988223 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637680321 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_285066 |
|---|
| Protein GI | 71907479 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000000934072 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0141672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC AGCTCAATCT CTTCGACCCG AACGCCAAGG CAGCCGCCAC CGAACCCGAG
GCGCCAGCCC TGCCTGCCAC CGAAACACAG GAACTGGCCC CCGAACTGCC ACTGGAAACC
GCTGCCGAGC CAGCGCTCGA ACCAGCGTCG GCCTTGCCGC CTGATCTGCC CCCGTCGGCC
ACCGGCCCGG CCAGCGACAT TCCCTCGCCG GCCGACTATG CCGCCCGCCG CTACCTCGAA
TACGCGATGA GCGTTGTCAC CGGTCGCGCC CTTCCCTCGG CCGCCGACGG CCAGAAGCCG
GTGCAGCGCC GCATCCTCTA CGCCATGCAC CGGATGGGCC TGTACAAGAG CCCGCGCCAC
GTCAAGTCGG CCCGCGTCGT CGGTGACGTG ATCGGTAAAT ACCATCCGCA CGGCGACTCC
TCGGTTTACG ACGCCATGGT CCGCATGGCC CAAGACTGGA GCCTGCGCTA CCCGATCGTC
GACGGCCAGG GCAATTTCGG CTCGCGCGAC GGCGATAACG CCGCTGCCAT GCGCTACACG
GAAGCCCGCC TGACGCCGAT TGCCGAACTG CTGCTGGCCG AGCTCGACGA AGGCACGGTT
GACTGGAAGC CCAATTACGA CGGCGCCAAC GATGAACCCG CCCTGCTCCC GGCCCGTCTG
CCCTTTGCGC TGTTGAACGG TGCCTCCGGC ATCGCCGTTG GCATGGCGAC GGAAATCCCC
GCGCACAACC TGCGCGAAGT GGCGAATGCG GCGGTCAATC TGATCAGGAA TCCCGATTTC
GGCGAAGACG AAGTGCTGAA ACTGATTCCA GGCCCGGACT ATCCCGGCGG CGCGCAGATC
ATCTCGTCGC CGGAGGAAAT CGCCGCCACC TACCGTAGCG GCCGTGGCAG CCTGCGCGTG
CGTGCCAAGT GGAAGATCGA AAACCTGGCC CGCGGCCAGT GGAAGCTGGT CATCACCGAA
TTGCCACCGG GCGTTTCCAC CGCCACCGTG ATGTCGGAAA TCGAGGCCTG CTCCAACCCG
GTCGCCAAGG AAAAAGCCGG CAAGAAGGTC TTTACGCCGG AACAGCTGAA TCTGAAGGCC
GCCTTCCTGT CGTCCATCTC GGAAAGCGGC GTGCGCGATG AATCGGGCAA GGAACACGCC
GTCCGCCTGG TCATTGAACC GGCATCCTCG CGCCAGGGTC AGGATGATCT GGTCCGCATG
CTGCTCGCTC ACACCAGCCT GGAAACCAAT GCTTCGATCA ACCTGACGAT CCTCGGCGTC
AATGGCACGC CGCGCCAGGC CTCGCTGTAC AGCATGATCG CCGAGTGGTG CCGCTTCCGG
CTGACTACCG TTGAACGGCG CACCCGCCAC CGCCTGACCG CCGCTGAAAA GCGCATCCAC
ATCCTCGAAG GCCGGCAGGC CATCCTGCTC GACATCGACC GCGTCATCAA GGTCATCCGC
GAATCGGACG ATCCCAAGGC CGACCTGATG GCGCACTTCA AGCTGTCGGA AATCCAGGCT
GAAGACATCC TCGAAATCCG CCTGCGCCAG CTGGCCAGGC TGGAAGGTAT CAAGATCGGT
GAAGAACTGG CCAAGCTGCG CGAAGAAGCG GCCGGCCTGA ACAAACTGCT CGATTCCGAA
GAAGCCCTGC GCGCCTGCGT GGCGGCCGAA ATCGAGGCCG ATGCCAAGAA ATACGGCGAC
GACCGCCGGA CGCTGATCGA AGCCGACGCC AAGGTCACGA TGTCGGACGC CAAGACAGTG
TCCATCGTTG ATGAACCGAC CACGCTGATC GTCTCCAAGC ACGGCTGGCT GCGTTCGCGT
ACCGGGCACA ACATCGATCC GACGCAACTG ACCTTCCGTT CCGGCGACAG CCTGCTCGCC
TGCCTGCCCT GCCGGACGGT CGATTCGCTG ATCATCCTCG ACCATCTCGG CCGTGCCTAT
TCCATTTCCG CCGCCGATAT TCCCGGCGGC AAGGGCGATG GCGTACCGGC CACCTCGGTG
GTCGACTTTC AGGATGGCGG CAAGCTCTGT CTTGCCCTGT CCACCTCTGC CGACAAGCGC
TATCTGGTCG CCGCCGACGG TGGCTACGGC TTCCGCTGCC AGGGCAGCGA CTTCCTGTCA
CGCGGCAAGG CTGGCAAGGC CTTCCTGACG CTGGGCGATG GCGAAGCACC AGCCATCTTC
ATGCCAGCCC CGGCTGAGGG CGAAATTGCC TGCGTCACCA AGGATGGCCG TGCGCTGGTC
TTCAACATCG AGGAAGTCCG CCTGCTGGCC AAGGGCCGTG GCCTGAAGCT GATCGACGCC
GCTCCCGGCA AGACGGCACT GGAAGAGATC ATTCCGGTCG TTGATGGCGT GGCCGGCAAG
CTGAAAGGCG AACGCCTGGA AATCTGCCGC GGCAACCGTG GTGGCAAGGG CAAGCCGGTA
AAGGCACCAC GCAAGTAA
|
|---|
| Protein sequence | MTDQLNLFDP NAKAAATEPE APALPATETQ ELAPELPLET AAEPALEPAS ALPPDLPPSA
TGPASDIPSP ADYAARRYLE YAMSVVTGRA LPSAADGQKP VQRRILYAMH RMGLYKSPRH
VKSARVVGDV IGKYHPHGDS SVYDAMVRMA QDWSLRYPIV DGQGNFGSRD GDNAAAMRYT
EARLTPIAEL LLAELDEGTV DWKPNYDGAN DEPALLPARL PFALLNGASG IAVGMATEIP
AHNLREVANA AVNLIRNPDF GEDEVLKLIP GPDYPGGAQI ISSPEEIAAT YRSGRGSLRV
RAKWKIENLA RGQWKLVITE LPPGVSTATV MSEIEACSNP VAKEKAGKKV FTPEQLNLKA
AFLSSISESG VRDESGKEHA VRLVIEPASS RQGQDDLVRM LLAHTSLETN ASINLTILGV
NGTPRQASLY SMIAEWCRFR LTTVERRTRH RLTAAEKRIH ILEGRQAILL DIDRVIKVIR
ESDDPKADLM AHFKLSEIQA EDILEIRLRQ LARLEGIKIG EELAKLREEA AGLNKLLDSE
EALRACVAAE IEADAKKYGD DRRTLIEADA KVTMSDAKTV SIVDEPTTLI VSKHGWLRSR
TGHNIDPTQL TFRSGDSLLA CLPCRTVDSL IILDHLGRAY SISAADIPGG KGDGVPATSV
VDFQDGGKLC LALSTSADKR YLVAADGGYG FRCQGSDFLS RGKAGKAFLT LGDGEAPAIF
MPAPAEGEIA CVTKDGRALV FNIEEVRLLA KGRGLKLIDA APGKTALEEI IPVVDGVAGK
LKGERLEICR GNRGGKGKPV KAPRK
|
|---|
| |