Gene Daro_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1828 
Symbol 
ID3566082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1966455 
End bp1968479 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content62% 
IMG OID637680299 
Productsensor histidine kinase 
Protein accessionYP_285044 
Protein GI71907457 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.719935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.143927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGGCC TGGGGTCTCT GACCACGCCT GACCGGCGTT CCATTCGCAC GCGCCTGCTT 
TTGCTGGCGC TGGTGCCGCT CGGCGTGGTG CTGCCGCTGA TCATGCTGGC GCTGGCCTAC
TGGGGCGGCA ACTATTTCGA CCAGCTGCTG GTGACCAAGG TGCGCAGCGA CCTCTCCGTC
GCCCACGGCT ATTTCGAGCG GGTGGCGGAA GGGGTTGGCC GTTCGGTCAC CAGCCTGGCC
GATTCTGAAC GGCTGGCGCG GGCGCTTGGC CGGGGAAAAA AGAGCAATGC GGAGAACAAC
GCGGCCAATG TGGCTAAATT GCTTGGTTCG ACCCAGCTTG AGCAAAAGCT TGATTTCCTT
CATTTTCTGG ACATCGAACG CGGCAAACAG GAGGCCCGCC TGTGGCCGGT GATCGCCGCT
GCGCTGGGAG GCAAGGCGGG GACTGAAACC GAGGTGTTTT CCAGCGAACA GCTGGGTTCG
ATCAATCCGG CGCTGGCGGC GCGTGCCAAA ACGCCATTGC TGGCCACCGC CAATGCCCGG
CCGGATGGTC GGGAGCTTGA AACGCGCGGT CTGGTGGTCC ATTCGGCCGC GCCGGTCTAC
GGCTCGAATG GCCGGCTGAT CGGCGTTCTG GAGGGCGGTG TGCTGCTCAA CAAGAACCTC
GATTTCATTG ATCAGATGAA TGCCATCGTC TATCCGGAAG GCGCCTTGCC CTTCGGCAGC
GCCGGCACGG CGACCCTGTT TCTCGACGAT GTCCGGGTTG CCACCAACGT CCGGCTGTTT
GGCGATACTA GGGCAATCGG GACGCGAGTC TCGGCCGTGG TGCACGATAC GGTCATCGGT
CAGGGACGCA CCTGGCTCGA CCGCGCCTTC GTTGTCAGCG ACTGGTATGT CTCGGCCTAT
GAACCCTTGC TCGATGGCCG GCAGCGACGG ATCGGCATGC TCTATGTCGG CTTTCTCGAA
GGCCCGTTCA TGACGGCCCG CATGCAGGCC TTTGCTGCGG TGGCCGGATT GTTCATTCTT
GCCATGCTGG TTGCCGGCAC CTTTGCCGTG GTTTCGGCCC GCCGGGTTTT CAAGCCGATC
GAGCGCATGC ACGCAACGAT GCATGCCATC GAACACGGCA ACCCGGATGC GCGAGTTGGC
ATTGTGGAAA GTCAGGATGA GCTCGGCGTG GTTGCCGCCC ATTTCGACCG CCTGCTCGAC
CAGTTGCAGG CTCAGGCCGA TTCGCTGAAA CGCTGGGGGG CGTCGCTCGA TGCCAAGGTG
GCGGAGCGCA CGGCTGAACT CCAGCAGGCG GTCGCCGATC TGAAGGCCGC CCAATCGCAA
CTGGTGATGA ACGAAAAGCT GGCGGCCATC GGCCAACTGA CGGCCGGGGT TGCTCACGAG
ATCAACAATC CGATTGCCGT TATCCAGGGC AACCTCGATG TGCTGCGCGA TGTGCTCGGA
CCGCAGGCCG AGCCAGTGGC ACAGGAGATC AAGCTGATCC ACGACCAGGT GCAGCGGGTC
CGCCTGATTG TCGCCAAACT GCTCCAGTTT GCCCGGCCGC AGGATTATGT CGGCTATCTC
GAACCGGTCG AGACCGGCCA ACTGATCCAG GATTGTCTGC TGCTGGTGCG CCACTTGCTG
AACAAGGGCG ATATCGCCAT TGAGCAGCAT ATTGATTCGA CGCGGCAGAT CCTCTGCAAC
AAGAACGAGT TGCAGCAAGT GATCATCAAC CTGTTCGTCA ATGCCATCCA GGCCATGCCC
GAGGGCGGGG TGCTAAAAAT TGCCGTCGAG GACTGGGACC AAGCTGACAT GCCGCTCGGC
ATTCGCCTGG TGGTTAGCGA TTCCGGTCCG GGGATCAGCG AGGCCGATCT GGCACAGCTG
TTCAAACCCT TCTTCACCGC CAAGAAGCCG GGCGGCAATG GCCTGGGCTT GTGGGTCAGC
CAGGCGCTGG TCGAGCGATA TGGTGGGAAA ATCAGTGCTG AAAGCGGACC CGAGCGTGGG
GCCAGTTTTA CCGTCTGGCT GCGCTTGGAG CCACAGGGGT TGTAG
 
Protein sequence
MPGLGSLTTP DRRSIRTRLL LLALVPLGVV LPLIMLALAY WGGNYFDQLL VTKVRSDLSV 
AHGYFERVAE GVGRSVTSLA DSERLARALG RGKKSNAENN AANVAKLLGS TQLEQKLDFL
HFLDIERGKQ EARLWPVIAA ALGGKAGTET EVFSSEQLGS INPALAARAK TPLLATANAR
PDGRELETRG LVVHSAAPVY GSNGRLIGVL EGGVLLNKNL DFIDQMNAIV YPEGALPFGS
AGTATLFLDD VRVATNVRLF GDTRAIGTRV SAVVHDTVIG QGRTWLDRAF VVSDWYVSAY
EPLLDGRQRR IGMLYVGFLE GPFMTARMQA FAAVAGLFIL AMLVAGTFAV VSARRVFKPI
ERMHATMHAI EHGNPDARVG IVESQDELGV VAAHFDRLLD QLQAQADSLK RWGASLDAKV
AERTAELQQA VADLKAAQSQ LVMNEKLAAI GQLTAGVAHE INNPIAVIQG NLDVLRDVLG
PQAEPVAQEI KLIHDQVQRV RLIVAKLLQF ARPQDYVGYL EPVETGQLIQ DCLLLVRHLL
NKGDIAIEQH IDSTRQILCN KNELQQVIIN LFVNAIQAMP EGGVLKIAVE DWDQADMPLG
IRLVVSDSGP GISEADLAQL FKPFFTAKKP GGNGLGLWVS QALVERYGGK ISAESGPERG
ASFTVWLRLE PQGL