| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1818 |
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| Symbol | |
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| ID | 3566072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1953453 |
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| End bp | 1955915 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680289 |
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| Product | formate dehydrogenase alpha subunit |
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| Protein accession | YP_285034 |
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| Protein GI | 71907447 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.266188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAGTC TGGCTCCGAC ATTTGGCCGT GGCGCAATGA CCAATCACTG GGTCGACATC
AAGAATGCCG ATGTCGTTTT GGTGATGGGT GGCAACGCCG CAGAAGCACA CCCGGTAGGA
TTCAAGTGGG TTATTGAAGC GAAGAAGCAG AACAAGGCAA AACTCGTCGT TGTCGACCCG
CGTTTCACGC GCTCGGCCTC GGTCGCCGAC TTCTACGCGC CCATCCGTAC CGGCACCGAC
ATCGCCTTCC TGGGCGGCGT CATCAATTAC CTGTTGACCA ACGACAAGAT TCATCACGAA
TACGTCAAGG CCTACACCGA CTTCAGTTTC CTGGTCGGCA ACGACTATGC CTTCGACGAC
GGCATCTTCT CGGGCTACAA CCCGGAGAAA CGCAGCTACG ACAAGGCCAG CTGGAACTAC
GTCAAGGGCG AGGACGGCTA CGTCAAGACG GACCCGACGC TGCAGGATCC GCGTTGTGTC
TATCAACTGA TGAAGCAGCA CTACAGCCGC TACACGCCGG AAATGGTCGA GAAGATCTGC
GGCACGCCGA AGGACGCCTT CCTCAAGGTC GCCGAAATGA TGGCCTCGAC GGCGACCGGC
GACCGAACGA TGACCATCCT GTACGCGCTG GGCTGGACGC AGCACTCGCA AGGCTCGCAG
ATGATCCGTA CCGGTGCCAT GGTGCAGATG CTGCTCGGCA ACATCGGTGT CGCCGGCGGC
GGCATGAACG CGCTGCGCGG TCACTCCAAC ATCCAGGGCC TGACCGACCT CGGCCTGATG
TCCAATCTGC TGCCGGGCTA CATGACCCTG CCGGGCGAGA AGGAGACCGA CTACGCGGCC
TACATCGCCA AGCGGGCGCC CAAGCCGATG CGCCCCAACC AGATGTCCTA CTGGCAGAAC
TACGAGAAGT TCCACGTCAG TCTGATGAAG TCGTGGTTCG GTGACGCCGC GACCAAGGAG
AACAACTGGG GCTTCGACAT GCTGCCCAAG CTGGACAAGG TGCATGACGT CCTGATGGTG
ATGGACGACA TGTACCAGGG CAAGATGAAC GGCTACTTCT GCCAGGGCTT CAACCCGCTC
GCCTCGTTCC CGAACAAGGC CAAGCTGGGC GCGGCGATGG CCAAGCTCAA GTACATGGTC
ATCATCGACC CGCTGGCCAC CGAGACTTCC GAATTCTGGA AGAACTACGG CGAGTACAAC
GACGTCGATC CGGCCAAGAT CCAGACCACG GTCTTCCGCC TGCCTTCATC GTGTTTCGCC
GAAGAAGACG GCTCGCTGGT CAGCTCCAGC CGCCTGCTGC AATGGCACTG GAAGGGCGCC
GAGCCCCCCG GCGAAGCGAA GACCGATCCG GCGATCATGG CCGGCATCTT CATGAAGCTC
AAGGCGATGT ACAAGGAAAA GGGCGGCGCC TATCCGGATG CCATCCTCAA CCTGACCTGG
GCCTACAAGG ACCCGTACGA ACCGTCACCG GAAGAAGTTG CCAAGGAGTA CAACGGCAAG
GCGCTGGTCG ACCTCTACGA CCCGAAGGAC CCGACCAAGC TGATCCGCAA GGCCGGCGAA
CAGCTGGACA GCTTTGCCCT GTTGCGCGAC GACGGCACGA CGACCAGCGG TTGCTGGATC
TTCAGCGGGG CATGGACGCA GGCCGGCAAC AACATGGCAC GGCGCGACAA CAGCGATCCG
TGGGGCAACG GCCAGACCCT GAACTGGGCC TGGGCGTGGC CGGTCAATCG CCGCATCCTC
TACAACCGCG CCTCCTGCGA TCCGAGCGGC AAGCCGTTCA ACCCGAAGCG CAAGCAGATC
TGGTGGAATG GCACGGCGTG GACAGGCTCC GACATCCCCG ATTTCAAGGC GGATTCGAAC
CCGGCCGACG GCATGGGGCC ATTCATCATG AACCCGGAGG GGATCGCCCG CTTCTTCGCC
CGCGAAATGA TGGCGGAAGG ACCGTTCCCG GAGCACTACG AGCCGTTCGA AACGCCGATC
GGCACCAACC CGATGAACAA GAATCCCAAG GCCATCAGCA ATCCGGCCGC CCGGGTGTTC
AAGGGGGACA TGGAAGTCTT CGGCACAGCC AAGGACTTCC CGTATGCCGC GACGACCTAT
CGCCTGACCG AGCATTTCCA CTACTGGACC AAGCACGCCA AGATCAACGC GATCCTGCAG
CCGGAACAGT TCGTGGAAAT CGGCGAGGAA CTGGCGAAGG AGAAGGGCAT CGCCAGTGGC
GACAAGGTCA AGGTGCGCTC CAACCGGGGC TTCATCAAGG CCGTGGCGGT GGTCACCAAG
CGCATCAAGG GGCTCAATGT GAACGGACAG AAAGTTCACC ACGTCGGCAT CCCCATCCAC
TGGGGATTCA AGGGCGTGGC GCGGATGGGC TTCCTGTCCA ACACCCTGAC GCCCTTCGTC
GGTGACGCGA ACTCGCAAAC ACCGGAGTTC AAGTCCTTCC TCGTCAACAT CGAGAAGATC
TAA
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| Protein sequence | MASLAPTFGR GAMTNHWVDI KNADVVLVMG GNAAEAHPVG FKWVIEAKKQ NKAKLVVVDP
RFTRSASVAD FYAPIRTGTD IAFLGGVINY LLTNDKIHHE YVKAYTDFSF LVGNDYAFDD
GIFSGYNPEK RSYDKASWNY VKGEDGYVKT DPTLQDPRCV YQLMKQHYSR YTPEMVEKIC
GTPKDAFLKV AEMMASTATG DRTMTILYAL GWTQHSQGSQ MIRTGAMVQM LLGNIGVAGG
GMNALRGHSN IQGLTDLGLM SNLLPGYMTL PGEKETDYAA YIAKRAPKPM RPNQMSYWQN
YEKFHVSLMK SWFGDAATKE NNWGFDMLPK LDKVHDVLMV MDDMYQGKMN GYFCQGFNPL
ASFPNKAKLG AAMAKLKYMV IIDPLATETS EFWKNYGEYN DVDPAKIQTT VFRLPSSCFA
EEDGSLVSSS RLLQWHWKGA EPPGEAKTDP AIMAGIFMKL KAMYKEKGGA YPDAILNLTW
AYKDPYEPSP EEVAKEYNGK ALVDLYDPKD PTKLIRKAGE QLDSFALLRD DGTTTSGCWI
FSGAWTQAGN NMARRDNSDP WGNGQTLNWA WAWPVNRRIL YNRASCDPSG KPFNPKRKQI
WWNGTAWTGS DIPDFKADSN PADGMGPFIM NPEGIARFFA REMMAEGPFP EHYEPFETPI
GTNPMNKNPK AISNPAARVF KGDMEVFGTA KDFPYAATTY RLTEHFHYWT KHAKINAILQ
PEQFVEIGEE LAKEKGIASG DKVKVRSNRG FIKAVAVVTK RIKGLNVNGQ KVHHVGIPIH
WGFKGVARMG FLSNTLTPFV GDANSQTPEF KSFLVNIEKI
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