| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1796 |
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| Symbol | |
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| ID | 3568345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1932366 |
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| End bp | 1934255 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680265 |
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| Product | peptidase U32 |
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| Protein accession | YP_285013 |
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| Protein GI | 71907426 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.191326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAA TTCAACACCC TCTCGAACTC CTCGCGCCGG CCAAGAATGC CGATTTCGGC
ATTGAAGCCA TCAAGCACGG GGCCGATGCC GTCTATATCG GCGGCCCGAC TTTCGGCGCC
CGTTACGGCG CCGGCAACAG CGTCGCTGAA ATCCGACGCC TGTGTGATTT TGCCCACCGC
TACCGGGCAA AAGTCTTCGT CGCGCTGAAC ACCATCCTGC ACGACGACGA ACTGGAAGGT
GCCCGACAGC TGGCCTGGGA ACTCTATGAA GCTGGCACCG ATGCGCTGAT CATTCAGGAC
ATGGGGCTGC TCGAAACCGA CCTGCCGCCG ATCCAGTTGC ACGCCAGCAC GCAAACTGAC
AACCGCAACC CGGCCAAGGT GAAGTTCCTC GAAGATGCCG GTTTTTCGCA AGTGGTCCTG
GCCCGCGAAA TGTCGATCCA GGAAGTCCAT GCCGTCGCCA GCGAAACCAC CCTCGCCCTC
GAATACTTTG TGCATGGCGC GCTGTGCGTC GCCTTTAGCG GCCAGTGCTA CATCAGCCAG
GCCCACACCG GGCGCAGCGC CAATCGCGGC GAATGCTCGC AGGCCTGCCG CCTGCCCTAC
ACGCTGGTCG ACGACAAGGG CAAGACGATC ACCGAGAACC AGCATCTGCT GTCGATGAAG
GACAACAACC AGACCGACAA CATGCTGGAA CTGGCCCGTG CCGGGGTCAG TTCGTTCAAG
ATCGAGGGGC GCTTGAAAGA CCTCTCCTAC GTCAAGAACA TCACGGCGCA TTACCGCACG
CTGCTCGACG AGATCATCGC CAACAACCCG GAATTCAGTC GAGCTTCCAG CGGCCACAGC
ACTTTCTCCT TCACGCCGCA GCCGGACAAA ACCTTCAATC GTGGCTATAC CGATTACTTT
GCCGGTGGCC GGCAGGACGA CATTGGTGCC TTCGATTCGC CAGCCTTCGT TGGCGAGTTG
ATTGGTGAGG TAGCCGATAT CGGCGATGGC TGGTTCATGG TCAATACCGA CCAGGATTTC
CACAACGGCG ACGGCGTCTG CTTCTACGAC GCCAATGGCG ACGTACTCGG CATGCGCATC
AACCGGGCCG AAGGCAAGAA ACTGTTCCCG GCCGAAATGC CGGAAGAACT GACCGAAGGC
GCCACGCTGT TCCGCAACCG CGACCAGGAA TTCGAACGGG CGCTGGAAAA GGACTCGGCC
GACCGGCGCA TTTCGGTGAA GCCGGTTTTC TCTGAAACCG CCAATGGCTT CCGCCTGACG
CTGACAGACG AAGATGGCGT GACCGTTGGC GTTGATCTGC CGAAAAGCGA GAAAATCGGC
CGCGAAGTTG CCCAGAACGC CGATCAGGCA CTGGCCAAAC TCAAGGAAAA TCTCGGCAAG
TTTGGCAACA CCATGTTTGT CGCAGAGCCG GTCGAACTGC AATTGTCGCA GCCTTGGTTT
CTGCCGGTCA GTGCGATCAA CGCCCTGCGC CGCGAAGCGA CCGAAAAGCT CGAAGCCGCC
CGTCTCGCCA GCCACCCGCG CCCGCCGCGC GCCCAGCCGG CCGACCATCC GGTGCCCTAC
CCACAGGACG AGCTGACCTA TCTCGGCAAC GTCTTTAACG CCAAGGCACG CGCCTTCTAT
GAAAAACATG GCGTCAAGCT GATCGAGGAA GCCTACGAGG CCGGCAACGA AAAAGGCATG
GTCTCGCTGA TGATCACCCG CCACTGCCTG CGCTACAGCT TCAATCTGTG CCCGAAGGAA
GTTAAGCACC TGAAGCCGGA CCCGATGACG CTGGTCAATG GCAACGAAAA GCTGATCCTC
AAGTTCGACT GCAAGGCTTG CGAAATGCAC GTCATCGGCA AGATGAAAAA GGGCGTCAAA
CTGAACCTGG GAACCATTCG TCCGGCATAA
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| Protein sequence | MTRIQHPLEL LAPAKNADFG IEAIKHGADA VYIGGPTFGA RYGAGNSVAE IRRLCDFAHR
YRAKVFVALN TILHDDELEG ARQLAWELYE AGTDALIIQD MGLLETDLPP IQLHASTQTD
NRNPAKVKFL EDAGFSQVVL AREMSIQEVH AVASETTLAL EYFVHGALCV AFSGQCYISQ
AHTGRSANRG ECSQACRLPY TLVDDKGKTI TENQHLLSMK DNNQTDNMLE LARAGVSSFK
IEGRLKDLSY VKNITAHYRT LLDEIIANNP EFSRASSGHS TFSFTPQPDK TFNRGYTDYF
AGGRQDDIGA FDSPAFVGEL IGEVADIGDG WFMVNTDQDF HNGDGVCFYD ANGDVLGMRI
NRAEGKKLFP AEMPEELTEG ATLFRNRDQE FERALEKDSA DRRISVKPVF SETANGFRLT
LTDEDGVTVG VDLPKSEKIG REVAQNADQA LAKLKENLGK FGNTMFVAEP VELQLSQPWF
LPVSAINALR REATEKLEAA RLASHPRPPR AQPADHPVPY PQDELTYLGN VFNAKARAFY
EKHGVKLIEE AYEAGNEKGM VSLMITRHCL RYSFNLCPKE VKHLKPDPMT LVNGNEKLIL
KFDCKACEMH VIGKMKKGVK LNLGTIRPA
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