Gene Daro_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1793 
Symbol 
ID3568342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1930529 
End bp1930999 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID637680262 
ProductOmpA/MotB 
Protein accessionYP_285010 
Protein GI71907423 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones86 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.557894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGA ATGATGATGA CGAATCAACC GCGGTAATCG TTGGGGTGTT GGCCGGCATC 
GTGCTGGCCG TCGTGGCCGT GGTCTATGGT GCCAGCGCCG GCAAGGGCTA CAAGCCTGCT
GCATCGGTCG TCCAGCAGGC CGAGATCGCA CCGGTCGGCG AAGCATTGGC CAAGGTCTTT
TTCGCGGTTG GCGCTGCTGC GCTCGACGAG GCCGACAAGG GTGTCGTCGC CAAGACGCTG
GAAGCCCTTT CGGCCAATCC GAACGCTATT GTGCTGCTCT CCGGGTTCCA CGATCCTTCC
GGCGATCCGG CCAAGAATGC CGAACTGGCC AAGCACCGCG CTCAGTCGGT GCGCGACGCG
CTGGTCGCCG CTGGCGTCGC CGCAGAACGC ATCAAGTTCC GCAAGCCTGA ATCGACGCTC
GGTGCCGGCA GTCCGGAAGA GGGGCGTCGC GTCGAGATTC GCGTCCAGTA A
 
Protein sequence
MAANDDDEST AVIVGVLAGI VLAVVAVVYG ASAGKGYKPA ASVVQQAEIA PVGEALAKVF 
FAVGAAALDE ADKGVVAKTL EALSANPNAI VLLSGFHDPS GDPAKNAELA KHRAQSVRDA
LVAAGVAAER IKFRKPESTL GAGSPEEGRR VEIRVQ