| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1750 |
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| Symbol | |
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| ID | 3568705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1880846 |
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| End bp | 1883131 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637680219 |
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| Product | surface antigen (D15):surface antigen variable number |
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| Protein accession | YP_284967 |
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| Protein GI | 71907380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.330816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CCCTGTTGTC CATCCTGATT GCCGGCATGT TTGCCACGCC AGCCTTGGCA
TTCGAACCTT TTGCGGTCAA GGACATTCGG GTTGAGGGAA TTCAGCGGAC CGAAGCTGGT
ACAGTTTTCG GGTATCTGCC CGTCAAGGTC GGTGATACCT TGAACGACGA GAAGGCTGCG
CAATCGATCA AGGCTCTTTT TGCGACCGGA TTCTTCAAGG ATGTCCGGAT TGAGGTTGAG
CAGGACGTGA TGGTCGTTGT GGTCCAGGAG CGCCCGGCTG TTGCGACCAT CAATTTTGTT
GGCCTCAAGG AATTTGACAA GGATGTCATC GTCAAGGCAC TCAAGGAAAC GGGGATCGCC
GAAGGGCGTA TTTTCGATCG TGCCCTGCTG GAAAAAGCCG AGCAGGAGCT CAAGCGCCAG
TATCTGACGC GCGGCAAGTA TGCGGCCAAT ATCACCACGA CCGTGACGCC GCTGGAGCGC
AATCGCGTTG GTGTCAACTT CAATATCGAA GAGGGTTCGG CAGCCAAGAT CAAGCAGATC
AATATTGTTG GTGCCAAAGC CTTCCGTGAG AAGGAATTGC TCAGCCAGTT CGAATTGACG
ACCCCGGGCT TGATCACCTG GTATACGAAG AATGATCAGT ATTCCCGGCA AAAATTGTCG
GCTGATCTGG AAAAACTGAA GTCGTTTTAC ATGAACCAGG GTTATCTGGA GTTTGCGGTC
GAGTCGACGC AGGTTTCCAT TTCTCCGGAT AAGCAGGATG TTTACATCAC TGCCAACATC
AATGAAGGCG ATCGTTATCA GGTATCGTCA GTCAAGATGG CCGGTGATTT TTCGATTGCC
GAAGATGAGT TGAAAAAACT CGTCACGATC AAGCCGGGTG ACGTATTTTC GCGTGACAAG
CTGAATGCAA CGACCAAAGC AATTAGCGAC CGCCTCGGCA AGGAAGGCTA TGCCTTCGCC
AACGTCAATG CTGCACCGGA AATTGACAAG GAAAAGCATC ATGTTGCTTT CACTATCTTT
GTTGATCCGG GTAAGCGGGT TTATGTTCGC CGCCTGAATA TTACGGGGAA TACCAAAACG
CGGGACGAGG TGGTTCGTCG AGAAATGCGT CAGATGGAAG GCGGTTGGTA CGATGCTGAC
AAGGTCACAA CATCCAAGCA ACGCGTTGAT AAGCTGGGTT TCTTCTCGGA AGTTGCGGTT
GAAACTCCTG CTGTCACTGG CACGTCCGAC CAATTGGACG TCAACGTCAA CGTTACTGAA
AAGCCGACCG GGAATTTGAT GCTGGGTGTC GGTACTTCGA GTACCGATAA GGTGATCCTG
TCTGGCTCCA TCGCCCAGAA CAACTTCATG GGTAGCGGCA ACAACGTCGC CATCCAGGTT
AATTCGGCCA AGACCTACAG GACATACGTT TTCTCCTATA CCAATCCTTA CTTTACGCAG
GATGGGGTGA GTCAAGGTTT TGACGTCTAT CATCGGACTG TCAATACGAC GTCTACAACG
CTTGCTTATT ATTCGTCATC ATCGACCGGT GGCGGCATTC GTTTTGGCTT TCCGATCGGT
GAAAAAGAGT CGATCGGTCT AGGCCTTGGG CTTGATTCGA CTAGTATCAC CACCTACGAC
CAGACGCCGC AGTACTACAA GGATTTTGTA CGTCGGTTTG GCGAAACGAA TATCTCGGTT
CCGCTGACTT TGAGCTGGGC GAGTGATGGC AAGGACAGCT TTTTCTTCCC GACCAAGGGG
ACGTTCCAGC GAGCATCCCT TGAGGTGGCT TTGCCTGGCG GTGATTTGAC CTATTACAGA
GCCAGTTATC AGCTCCAGCA CTTTGTGCCG CTAAACTCGA AATTCACGCT GATGCTGAAC
GGCGAATACG GGATGGCTAA TGGTTATGGC GCGTCCGGGC TTCCGTTCTT CAAGAATTAT
TATGCGGGTG GTGTAACCTC TGTTCGTGGC TACAAGGCCT CTTCACTGGG CCCAATCTAT
ACGGATTCTT CCACGGGTAC GCAATATCGC TTGGGTGGCA ATCGCCGCGT GATCGGTAAT
GCAGAGTTAC TGTGGAGCCT GCCGGGAATG GATAAGTCGT TCCGCATGGG GTGGTTCTTT
GATGCGGGTC AGGTCTTTGG CAGTGACGAA AAGCTTGATT TCGCAGAATT GCGTTATTCC
TCAGGTCTTT CGGCTGCCTG GATTTCACCT ATCGGGCCGC TAAAATTCAG TTTCGGTCGG
CCTTTGAACA AAAAAGAAGG CGATAAGTCC GAAGTGTTCC AGTTCCAGTT GGGCACCACG
TTTTAA
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| Protein sequence | MKKSLLSILI AGMFATPALA FEPFAVKDIR VEGIQRTEAG TVFGYLPVKV GDTLNDEKAA
QSIKALFATG FFKDVRIEVE QDVMVVVVQE RPAVATINFV GLKEFDKDVI VKALKETGIA
EGRIFDRALL EKAEQELKRQ YLTRGKYAAN ITTTVTPLER NRVGVNFNIE EGSAAKIKQI
NIVGAKAFRE KELLSQFELT TPGLITWYTK NDQYSRQKLS ADLEKLKSFY MNQGYLEFAV
ESTQVSISPD KQDVYITANI NEGDRYQVSS VKMAGDFSIA EDELKKLVTI KPGDVFSRDK
LNATTKAISD RLGKEGYAFA NVNAAPEIDK EKHHVAFTIF VDPGKRVYVR RLNITGNTKT
RDEVVRREMR QMEGGWYDAD KVTTSKQRVD KLGFFSEVAV ETPAVTGTSD QLDVNVNVTE
KPTGNLMLGV GTSSTDKVIL SGSIAQNNFM GSGNNVAIQV NSAKTYRTYV FSYTNPYFTQ
DGVSQGFDVY HRTVNTTSTT LAYYSSSSTG GGIRFGFPIG EKESIGLGLG LDSTSITTYD
QTPQYYKDFV RRFGETNISV PLTLSWASDG KDSFFFPTKG TFQRASLEVA LPGGDLTYYR
ASYQLQHFVP LNSKFTLMLN GEYGMANGYG ASGLPFFKNY YAGGVTSVRG YKASSLGPIY
TDSSTGTQYR LGGNRRVIGN AELLWSLPGM DKSFRMGWFF DAGQVFGSDE KLDFAELRYS
SGLSAAWISP IGPLKFSFGR PLNKKEGDKS EVFQFQLGTT F
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