Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1748 |
Symbol | |
ID | 3568703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1878282 |
End bp | 1879478 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637680217 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_284965 |
Protein GI | 71907378 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCCA AGTTGCAAAA TATCACTGTC CTTGGTGCTA CCGGATCGAT CGGGGTCAGT ACGCTGGATG TGATTCGCCG ACATCCGGAT CGCTATCGTG CCTTTGCGCT TTGCGCGCAT TCTCAGGTCG ACAAGCTATT TGAGCAGTGT GTCGAGTTTC GCCCACGTTT CGCTGTATTG CGCGATGCTT CTCTGGCTGC GACGCTCTCT GAGCGATGTC GTTCTGTCGG GCTGGATACC GAGGTCCGGT ATGGTGTCGA GGCGCTGATT GAATTGTCGT CATTGCCCGA GGTCGATGCG GTGATGGCTG CTATCGTCGG TGCGGCTGGT CTCGAACCGA CACTGGCTGC TGCGCGGGCT GGCAAAAAGG TCATGCTGGC TAACAAGGAA GTCCTGGTCA TGGCTGGCGA ACTGTTCATG CATGCGGTGC GTGAATATGG TGCAACCTTG CTGCCAGTCG ACAGTGAGCA CAACGCCATT TTTCAGTCGC TGCCAGCCGA TTTTGCGCGT GGGCTTGAGT CCTGCGGTGT GCAAAAGATA TTGCTGACGG CCTCAGGTGG CCCGTTCCGT AACTCGCCGC TGGCCGATCT GGCCAATGTC ACCCCGGAAC AGGCCTGCGC CCACCCGAAC TGGGTCATGG GGCGCAAGAT TTCGGTCGAT TCGGCAACGA TGATGAACAA GGGGTTGGAA GTCATCGAGG CGCACTGGTT ATTTGCTGCG CCACCGGACA TGATTCAGGT CGTTGTGCAT CCGCAGAGTG TTATTCATTC GGCGGTCCAG TACGCAGATG GCTCGGTGCT GGCCCAGTTG GGTAATCCCG ATATGCGCAC GCCGATTGCC TATGCAATGG CTTGGCCAGA GCGTATTGCC GCAGGTGTCG AGCCGCTCGA CCTGTTCAAG ATTGCCCGTC TTGACTTCTC CGCTCCTGAT TTTGAGCGTT TCCGTTGCCT GCAACTGGCT TACGACGTTC TACGCGAAGG CGGTACCGCG CCGGCTATTC TCAATGCAGC CAATGAAGTT GCGGTAGCTG CCTTCCTAGA CGGTCACTTG CCGTTCCTCG GGATCGCCTT GCTTAACGAG GCCGTATTGC AGGCAATGCC GGCTGGCCCC GAGGGCAGTC TGGCCGATGT GTTGGCGGCG GATGCCGAAG CCCGTCATCT GGCTGGCCAG TTGATCCGGC AACAGCGTTT CGCGTGA
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Protein sequence | MSSKLQNITV LGATGSIGVS TLDVIRRHPD RYRAFALCAH SQVDKLFEQC VEFRPRFAVL RDASLAATLS ERCRSVGLDT EVRYGVEALI ELSSLPEVDA VMAAIVGAAG LEPTLAAARA GKKVMLANKE VLVMAGELFM HAVREYGATL LPVDSEHNAI FQSLPADFAR GLESCGVQKI LLTASGGPFR NSPLADLANV TPEQACAHPN WVMGRKISVD SATMMNKGLE VIEAHWLFAA PPDMIQVVVH PQSVIHSAVQ YADGSVLAQL GNPDMRTPIA YAMAWPERIA AGVEPLDLFK IARLDFSAPD FERFRCLQLA YDVLREGGTA PAILNAANEV AVAAFLDGHL PFLGIALLNE AVLQAMPAGP EGSLADVLAA DAEARHLAGQ LIRQQRFA
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