Gene Daro_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1741 
Symbol 
ID3568483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1872501 
End bp1873463 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content59% 
IMG OID637680210 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_284958 
Protein GI71907371 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGG AAATGGCATA CTCCACAGGT TTTCAACTTG CTTGTATTGC GATGAAGATT 
CTTCTACTCG GTAAGGATGG CCAGGTCGGC TGGCAGTTGC AGCGCTCCCT GGCGCCACAT
GGTGACGTCG TGGCTTGCGG TCGTGCCCAG TGCGATTTGT CCGATCTGGC GCAAATTCGT
TCCGTGGTGC GCGAAACTCG TCCTTCGGTC ATCGTCAATG CGACCGCCTA TACGGCAGTT
GACAAGGCTG AGTCCGAGCC TGAGTTGGCG AGACGCATCA ACGCCGATGC ACCCGGTGTT
CTGGCCGAGG AAGCTGCGCA GCTCAATGCT TTGCTGGTCC ATTACTCAAC GGACTACGTC
TACGACGGTG CCAAGGCCTC CGCCTATCTT GAAACGGATG TGACTGCGCC GCAGAGTGTC
TATGGTCGGA CCAAGCTGGC TGGCGAGGAG GCGATTCGTG CTGCAGGCGG AAAATCCCTT
ATCTTTCGGA CTAGCTGGGT GTTCGGCGCG CGTGGTGGGA ACTTCGTCAA GACCATCCTG
CGCCTGGCGC GGGAAAAGGA AAGTTTGAAT GTTGTCGCCG ACCAGATCGG CTCGCCGACC
CCGGCTGCCC TTATTGCCAC GGTGACCGGC ATTGCTCTGG CCATGCTGCA GCACGGAAAA
TTGCTCGAAA AGAGTGAAAG CCGCTTGTAT CACCTGGCCG CATCGCGGCC GGTCAGTTGG
TGCGATTTTG CCCGGACGAT CGTGGGGTTG GCCGGGCAGG CTCCAGGCTT CGATTTGCGC
CTGAAGTCCG GGGCAATACA GGCAATATCC ACTGCGGAAT ATCCCACGCC AGCGTGTCGC
CCTGCCAACT CCCGGCTGGA CTGCGGTCGT CTGGAAAACG ATTTTGGTTT GCAGATGCCA
GACTGGCAGC CTTACCTCGA ACGGATGCTG CAACTGCTGG CTTTGAAGCA GAACGGCTAC
TGA
 
Protein sequence
MPREMAYSTG FQLACIAMKI LLLGKDGQVG WQLQRSLAPH GDVVACGRAQ CDLSDLAQIR 
SVVRETRPSV IVNATAYTAV DKAESEPELA RRINADAPGV LAEEAAQLNA LLVHYSTDYV
YDGAKASAYL ETDVTAPQSV YGRTKLAGEE AIRAAGGKSL IFRTSWVFGA RGGNFVKTIL
RLAREKESLN VVADQIGSPT PAALIATVTG IALAMLQHGK LLEKSESRLY HLAASRPVSW
CDFARTIVGL AGQAPGFDLR LKSGAIQAIS TAEYPTPACR PANSRLDCGR LENDFGLQMP
DWQPYLERML QLLALKQNGY