| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1734 |
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| Symbol | |
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| ID | 3568476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1864080 |
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| End bp | 1866131 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680203 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_284951 |
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| Protein GI | 71907364 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.39998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGC CGGAAGATGT TGCCAAGCGC GCAGCATGGT ATCGATCCGA GCTGGAGCGT
CATAGTTATG CCTATTACGT GCTCGATGCA CCGACTATCC CTGATACCGA ATACGACAAG
CTTTTCCGTG AGCTGCAGGA GCTGGAACAG CAATATCCAG AACTGCTAAC TGCGGATTCG
CCAACCCACC GCGTTGGAGG CGTGCCGCTC AAGGAATTCC CGCCACGCCA ACACGGCGTG
CCCATGCTGT CGTTGAATAA TGCCTTCGCG CCGGAAGAGG TCGAAGCCTT CGACAAGCGA
ATCCGTGATG GCCTGGAGAC GATTGCCGCG GTTGACTATG CCGTGGAGCC AAAATTTGAT
GGGCTGGCGA TCAGTCTGAC ATATGAAAAC GGTGTCTTTA CCTGCGGCGC AACCCGCGGA
GACGGCGTAA CCGGCGAGGA AGTGACGCCC AATCTGCGTA CCTTGCGCTG CATTCCGCTG
CGTTTGCGGG GCGAAGGCTG GCCGGCGCTG ATCGAGATTC GTGGCGAAGT GCTGATGTTC
AAAGCCGATT TCGCCGAACT CAACGCACGA CAACGGGAGC GTGGCGACAA GGAGTTTGCC
AATCCGCGCA ACGCCGCGGC CGGTAGCCTG CGCCAGCTCG ATTCAAAAAT CACCGCCGGG
CGCCCACTGT CCTTCTTCGC CTATGGCGTC GGGGCAGGCG CCGATGCGTT GGCCGTCAAG
ACGCACGGCG AGATGATGGG CCTCCTGGCC GCTTGGGGCT TCCCTGTAGC GGAGGAGCGC
CGTGTGGTGC AGGGTGTGCG CGGCCTGCTC GGCTATTTTG TCGAGATCGG CGTCAAGCGT
CCGGGCCTGC CCTACGACAT CGACGGCGTG GTCTACAAGG TCAATCGCCT CGACTGGCAG
GCGCAACTGG GTTTCGTCTC GCGCGCCCCG CGTTTTGCCA TCGCCCACAA GTTCCCGGCC
GAAGAAGCGC TGACTGAAGT GCTTGGTATT GATGTTCAGG TTGGCCGCAC CGGGGCAATT
ACGCCGGTCG CCCGCCTGAA GCCGGTCTTC GTCGGTGGCG TGACAGTGAC CAACGCGACG
CTGCACAACG AGGATGAGGT GCGGCGCAAG GATGTCCGGC TCGGCGATAC GGTGATCGTC
CGCCGGGCCG GTGACGTGAT TCCCGAGGTG GTCGCCATCG TTCCGGAGAA GCGCCCGATG
CGTGACTTGT TCGGTAGCGA ACCCTTGAAT CCGCCATTCG AGTTGCCCGC CACCTGCCCG
GAATGTGGCT CGGCGGTGGT AAAGGGCGAC GACGAAGCCA TCGCCCGTTG CACCGGTGGC
CTCTATTGCC CGGCCCAGCG CAAGCAGGCG CTGTGGCATT TTGCGGCGCG CCGGGCGATG
GATATCGAAG GTCTGGGCGA CAAGCTGGTC GATCAACTGG TCGATGCCGG GCTGGTTCAT
TCGCCGGCCG ATCTCTATGG CCTGACGGTC GAAACGCTGG CCGGGCTGGA GCGCATGGGT
GAGAAGTCGG CTCAGAATCT GGTGGCAGCG ATCGATAAAA GCCGGCAAAC GACCTTGGCC
CGCTTTATCT TCGGGCTGGG CATCCGCAAT GTGGGCGAAG CAACGGCGCG TGACCTGGCC
AAGCATTTCG GCGGACTGGA TGCCTTGCTC GCGGCCGATA GCGCTGCACT GCAAATGGTC
CCCGATGTCG GGCCGGTAGT CGCCGAGAGC CTTGCCGCTT TCTTTGCCGA GGCCCACAAC
CGCGAGGTCA TCGATGGTTT ACGCCGGGCG GGCGTGAGTT GGCCGGAAGG CGAACCGGCG
CAGGCAGGAC CACAGTTATT GGCTGGCAAG ACGCTGGTGC TGACTGGCAC GCTACCGACG
CTGAAGCGCG ATGAGGCGAA GGCGCTGGTC GAGGCGGCCG GTGGCAAGGT CGCGGGCTCG
GTGTCGAAGA AGACGGATTA TGTGGTCGCT GGCGAGGAAG CCGGTTCCAA GCTGGAAAAG
GCTCAGGAGC TGGGGGTGCC GGTGATCGAT GAGGCAGAAT TGATGAAATT GCTCGCAAAG
GGAGTCGAAT AA
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| Protein sequence | MGLPEDVAKR AAWYRSELER HSYAYYVLDA PTIPDTEYDK LFRELQELEQ QYPELLTADS
PTHRVGGVPL KEFPPRQHGV PMLSLNNAFA PEEVEAFDKR IRDGLETIAA VDYAVEPKFD
GLAISLTYEN GVFTCGATRG DGVTGEEVTP NLRTLRCIPL RLRGEGWPAL IEIRGEVLMF
KADFAELNAR QRERGDKEFA NPRNAAAGSL RQLDSKITAG RPLSFFAYGV GAGADALAVK
THGEMMGLLA AWGFPVAEER RVVQGVRGLL GYFVEIGVKR PGLPYDIDGV VYKVNRLDWQ
AQLGFVSRAP RFAIAHKFPA EEALTEVLGI DVQVGRTGAI TPVARLKPVF VGGVTVTNAT
LHNEDEVRRK DVRLGDTVIV RRAGDVIPEV VAIVPEKRPM RDLFGSEPLN PPFELPATCP
ECGSAVVKGD DEAIARCTGG LYCPAQRKQA LWHFAARRAM DIEGLGDKLV DQLVDAGLVH
SPADLYGLTV ETLAGLERMG EKSAQNLVAA IDKSRQTTLA RFIFGLGIRN VGEATARDLA
KHFGGLDALL AADSAALQMV PDVGPVVAES LAAFFAEAHN REVIDGLRRA GVSWPEGEPA
QAGPQLLAGK TLVLTGTLPT LKRDEAKALV EAAGGKVAGS VSKKTDYVVA GEEAGSKLEK
AQELGVPVID EAELMKLLAK GVE
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