| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1727 |
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| Symbol | |
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| ID | 3568469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1855373 |
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| End bp | 1856563 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680196 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_284944 |
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| Protein GI | 71907357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 0.963211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC ACCTCGCCCA ACTCCAGCCC TACCCCTTCG AAAAGCTGCG CGCCCTGTTC
GCTGGCGTCA CGCCGAACCC GCAATATAAA GAGATCAAGC TCTCCATCGG TGAGCCACAG
CACCCGACGC CGGCGTTCAT CATGGACGCG CTGGCCAACG GCCTGAAGGG CCTTGCCAAC
TATCCCACGA CGCAGGGTAT TCCGCTGCTG CGCCAGACCA TTGCCAAATG GTGCCGCCAT
CGCTACGGAC TGGAACTGAA TCCGGAAACG GAGATCCTGC CGGTCAACGG TTCCCGCGAA
GCACTTTTTT CCTTCGCCCA GACGGTCATT GATCCAAGCC GCGGCCACGT GCCGTTGATC
GTCAGCCCGA ATCCGTTCTA CCAGATCTAC GAGGGGGCCG CCTACCTGTC CGGTGCCGAG
CCGCGCTTCC TGAACAACCT GCCGGACAAC GATTTCGCTT TCGACTATGC CAGCCTGAGC
GAAGAAGAAT GGGCCCGCGT CCAGTTGTTC TACGTCTGCT CGCCGGGCAA TCCGACCGGC
AAGGTGCTGT CGCTGGCAGA CTGGAAAACG CTGTTCGCGC TGTCCGACAA GTACGGCTTC
ATCATCGCCT CCGACGAGTG CTACTCGGAA ATCTATTTCG ACGAAGCCAA TCCGCCGATC
GGCGGACTCC AGGCGGCCAA GCTGCTCGGC CGTACGAATG AGCGCCTGGT CATGTTCTCC
AGTCTGTCCA AGCGCTCCAA TGTGCCGGGC ATGCGCTCCG GTTTTGTCGC CGGCGACGAG
AAAATCCTGA AGAAATTCCT GCTTTACCGC ACCTACCACG GCTGCGCCAT GGCGCCTCCA
GTGCAGACAG CTTCCATCGC GGCCTGGAAC GACGAGTCCC ACGTGCTCGA CAATCGCAAT
CAGTACCGCG AAAAATTCGC AGCCTGCACG CCGCTGATCG GCGAAGTGCT CGGCACCGGC
ATGCCGGACG CCAGCTTCTA TCTGTGGGCG AAGACCCCGA TTGCCGACAC CGAGTTCGCT
CGCGGCCTGC TCGAACACTA TAATGTCGTC GTTCTGCCCG GCAGCTTCCT GGCCAGAGAA
GTCAGGGGCG TCAATCCGGG CGCCAATTTT GTCCGTATTG CGCTGGTCGC TTCGCTTGAC
GAGTGTCTCG AAGCAACCCA GCGCATCCGT CAATTTGCCC AACAACTGTA A
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| Protein sequence | MNPHLAQLQP YPFEKLRALF AGVTPNPQYK EIKLSIGEPQ HPTPAFIMDA LANGLKGLAN
YPTTQGIPLL RQTIAKWCRH RYGLELNPET EILPVNGSRE ALFSFAQTVI DPSRGHVPLI
VSPNPFYQIY EGAAYLSGAE PRFLNNLPDN DFAFDYASLS EEEWARVQLF YVCSPGNPTG
KVLSLADWKT LFALSDKYGF IIASDECYSE IYFDEANPPI GGLQAAKLLG RTNERLVMFS
SLSKRSNVPG MRSGFVAGDE KILKKFLLYR TYHGCAMAPP VQTASIAAWN DESHVLDNRN
QYREKFAACT PLIGEVLGTG MPDASFYLWA KTPIADTEFA RGLLEHYNVV VLPGSFLARE
VRGVNPGANF VRIALVASLD ECLEATQRIR QFAQQL
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