| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1724 |
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| Symbol | |
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| ID | 3568543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1852193 |
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| End bp | 1853326 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680193 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_284941 |
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| Protein GI | 71907354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA CCACGCTCGA ACTGGCCAAG CGAATCATCG CCTGCGCCTC CGTGACGCCT
GAAGACGCAG GCTGCATGGA CATTCTGATC GAACGGCTGA AGCCGCTCGG CTTCAGCATC
GAATTCATCA ATCGCAACGG CGTGACCAAC CTGTGGGCCC GCCGCGGCAC GACCGCACCG
CTGTTCGTCT TCGCTGGCCA TACCGACGTC GTGCCGACCG GCCCGCTCGA CAAATGGACC
TCGCCCCCCT TCGCCCCGGA AATCCGCGAC GGCGTGCTGT ATGGGCGTGG CACGGCCGAC
ATGAAATCCT CGGTCGCCGC TTCGGTAACC GCCGTCGAAG CCTTTGTTGC GGCCAACCCA
CAACACCCCG GCTCCCTGGC TTTCCTGCTT ACCTCCGATG AAGAAGGTGA CGCCAATGAC
GGCACCATCG CTGTCGTTGA GGCGCTGAAA GCCCGTGGCG AAACGCTCGA TTTCTGCATC
ATCGGCGAAC CGACCTCGGT CGATACGCTC GGCGACATGG TCAAGAACGG CCGCCGCGGA
TCGCTGTCCG GCGTGCTGAC GGTCAAGGGC ATCCAGTGCC ACATCGCCTA TCCGGAAAAG
GGGCGCAATC CGATCCACGA AGCCGCTCCG GCGCTGGCCG AACTGGCTGC GACCGAATGG
GATCAGGGCA ACGAGTATTA CCAGCCGACT ACCTGGCAAA TTTCCAACAT TCACGGCGGC
ACCGGCGCCA CTAACGTTGT ACCGGGCAGC GTCGACATCA AGTTCAATTT CCGTTTCTCG
ACGGCCAGCA CGCCGGAAGG GCTGCAACAA CGCCTGTCCG CCATCCTGGA AAAGCACAAG
CTCGACTACG AAATCAAATG GACGCTGGGC GCCCGCCCCT TCCTGACCGG CCGTGGCCCA
CTGGCCGATG CGGCGACGAC GGCCATCCGC GAAATCTGCG GCATCGAAAC CGAACTATCG
ACCACCGGCG GCACCTCCGA CGGCCGTTTC ATTGCCGAAA TCTGCCGCCA GATGCTCGAA
ATCGGCCCGG TCAATGCCAC CAGCCACAAG ATCGACGAAT GCATTGCCGT CGACGCATTG
CCCAAGCTGT CCGCCATCTA TCGCCGCATC CTTGAACAAT TGATGACCGC ATGA
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| Protein sequence | MSDTTLELAK RIIACASVTP EDAGCMDILI ERLKPLGFSI EFINRNGVTN LWARRGTTAP
LFVFAGHTDV VPTGPLDKWT SPPFAPEIRD GVLYGRGTAD MKSSVAASVT AVEAFVAANP
QHPGSLAFLL TSDEEGDAND GTIAVVEALK ARGETLDFCI IGEPTSVDTL GDMVKNGRRG
SLSGVLTVKG IQCHIAYPEK GRNPIHEAAP ALAELAATEW DQGNEYYQPT TWQISNIHGG
TGATNVVPGS VDIKFNFRFS TASTPEGLQQ RLSAILEKHK LDYEIKWTLG ARPFLTGRGP
LADAATTAIR EICGIETELS TTGGTSDGRF IAEICRQMLE IGPVNATSHK IDECIAVDAL
PKLSAIYRRI LEQLMTA
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