Gene Daro_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1710 
Symbol 
ID3568527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1837712 
End bp1839223 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content51% 
IMG OID637680177 
Producthypothetical protein 
Protein accessionYP_284927 
Protein GI71907340 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.792915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGGCA AACCCCGGAT ACGGCTTACT TCAACCAGCC GCTGCTCGCC GCAGCGGCTT 
AACCCGCAGA GAAATCACTT AAGAAAACCG AATTTCTGTC CAACTGCGCG GGGCCACCTC
TCAGATATGC TGCACGAATC TGCATTAAGA GTGTTTAGGG ATAGCCCTTT TGAAACACTC
CGCATTCCAT TTCTTCTGGC CAAAGGCAAG GCTTTTTTGA AGCAACACCT TGCTTCGCGA
ACTGAGTTTG ACCCTAAAAC ACTTCCATAC AACGAAGAAT TGCTTGAATG GCTCAAGCAA
CAGCGTAACG AGGGTCGGTG CTTGGTCTTG TGCACAGCAT CAGATCGATC AATTGCCGAC
CTCATTTCTG AACACTTGGG TATATTCGAT GAGGTCATAG CCAGTGATGG CGTCTCGAAT
ATTGCGGGGG AACATAAAGC TGCAGCCTTG GTACAGCGCT TCGAGCATCA TGGGTATGAC
TATGCGGGCA ACTCCCATAA AGATTTACCG GTATGGTTGC ACGCGCACAA GGCAATAGTC
GTTAACGGTT CGAGCGGTCT GGTCCAAAAG GCCCAAGATA TTGCAACGGT TGAACGAGTA
TTTCCCAAAC GAGATATCGG GTTTTCTGCA TGGCGCCGGG TTCTACGTAT CCATCAGTGG
CTAAAAAATC TTCTCCTTTT TGTTCCACTG TTTGCCGCTC ATGATCTGGG CAACGGGGCG
GCTTGGACAT CGCTGCTGCT TGCATTCGTA GCGTTTAGCC TTTGCGCTTC ATCGGTGTAC
ATAGCCAATG ATTTGCTCGA TCTCGAAAGC GACCGCTTAC ATCCCCGAAA GCGAAACCGA
CCGTTTGCCT CTGGCCTTGT GCCCGCGTGG GCAGGCGTCT TGGTTGCGCC ACTGCTTCTA
ATCGTCAGTC TGGGCGTGGC CGCGTTGGTC GGGAAACAGT TCTTGTCTTG GCTCATTTTC
TACTTTGCCT TGACATGCGC CTACTCATGG GTACTCAAAC GGTTGATGTT GATTGATTGC
CTCACACTGG CGTTACTTTA TACCTTGCGG ATTATTGCTG GCGCGGCAGC TGTTGGGCAC
GAACTCTCAT TCTGGCTTTT GGCCTTTTCA GTGTTTCTGT TCCTTTCTCT TGCGTTCATC
AAACGCTACG CTGAGTTAGA GGTTCAATTG CTCAGCGGCA AGGAGAAAAT TCATGGACGT
GGCTACCACA CTACCGATGC GCCGTTGATC CAGACCATGG GTATCGTGGC TGGATACTCA
TCCGTTTTGG TGTTGGCGCT GTATTTGAAC AGTAATGCCG TACTGAAGCT GTATGCAGCA
CCTGAGTTGA TTTGGGGCGC AGTGCCCGTC ATGCTGTTCT GGGTAAGCTG GATGTGGATG
CAAGCCCACC GGGGAAAAAT GCACGACGAC CCGCTCGTAT TTGCAGTTAA AGATCGCGCA
AGTCTCGGCG CGGGTGCCAC TTTTTCAGCC ATTTTGATCG CCGGTACTAT GGGGGTCTCA
TGGTGGCCGT AA
 
Protein sequence
MTGKPRIRLT STSRCSPQRL NPQRNHLRKP NFCPTARGHL SDMLHESALR VFRDSPFETL 
RIPFLLAKGK AFLKQHLASR TEFDPKTLPY NEELLEWLKQ QRNEGRCLVL CTASDRSIAD
LISEHLGIFD EVIASDGVSN IAGEHKAAAL VQRFEHHGYD YAGNSHKDLP VWLHAHKAIV
VNGSSGLVQK AQDIATVERV FPKRDIGFSA WRRVLRIHQW LKNLLLFVPL FAAHDLGNGA
AWTSLLLAFV AFSLCASSVY IANDLLDLES DRLHPRKRNR PFASGLVPAW AGVLVAPLLL
IVSLGVAALV GKQFLSWLIF YFALTCAYSW VLKRLMLIDC LTLALLYTLR IIAGAAAVGH
ELSFWLLAFS VFLFLSLAFI KRYAELEVQL LSGKEKIHGR GYHTTDAPLI QTMGIVAGYS
SVLVLALYLN SNAVLKLYAA PELIWGAVPV MLFWVSWMWM QAHRGKMHDD PLVFAVKDRA
SLGAGATFSA ILIAGTMGVS WWP