| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1683 |
|---|
| Symbol | |
|---|
| ID | 3568576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1810940 |
|---|
| End bp | 1811839 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637680150 |
|---|
| Product | HDIG |
|---|
| Protein accession | YP_284900 |
|---|
| Protein GI | 71907313 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATAATG CAGCCATGAT GATTGCTGAC GCCCATGACC CCAACGATCC GGACAAGAAA
GGTGACGCCC TGAAGGCACA GCGCTTTCAG ATGTTGGCCG ACATCGCCAA GGAACTCTCT
GGCGAAGTGG TGTTTCCGAC TTATTTCGAT GCCGTACTGC GCCTGCGTAA AGCCTTGCAT
GACCGCGACC AGAGTATCGC CAACATTGCC CATGCCGTTT CGGTCGAGCC GCTGATTTCA
GCCAAGCTGC TCCAGCTGGC CAACTCGGTC GCCTTCAATC CGCAGGGAAA TGAGGTGGTC
GACCTGAAAT CAGCCATCGT CCGCCTGGGA CTCAATGCAG TGCGAACGGC TGCGCTCTCA
ATCGTGATGA CCCAGTTGAT GCGGGCAAAA GGCATGGCCG AGTTTTCAGA AATTACCCGC
GGCCTCTGGG AACATTCCAT CCAGACCTCC GCCGCGGCCA GGGTCATCGC CAGGCAGATG
CCCCGCCTGA ACGCTGACGA AGCCATGCTG GCCGGCCTGA TTCACGATCT GGGCGCGTTC
TACATGCTCT ATCGGGCAAC CCAGTACCAG GAACTCCGCC ATCGCCCGGA GAGCATCAAG
TACCTGATCG TCAATTGGCA TGAAAGCATC GGCGTTTCTT TACTTAACGC CCTGGGACTG
CCGGCGGAAA TCGTCGAAGC CACGGCGGAC CACGATCATA TGCGCTCGAT CCCAACCGCC
ATCAAAACCC TGTCGGAGGT CATCTACGTG GCCAACATGC TCTGTGGCGG GCATTTTGAA
TGGCTGATGC AGGATCAACC GGAAATACCG TCCGAACTCG CCGCGCTGGA AGAAGAATTC
GGCCATCTGC GGCCTGAAAT CGAGGCCTTG ACGGCAGAAA TGCGCGACAG CTTCAGCTGA
|
|---|
| Protein sequence | MNNAAMMIAD AHDPNDPDKK GDALKAQRFQ MLADIAKELS GEVVFPTYFD AVLRLRKALH
DRDQSIANIA HAVSVEPLIS AKLLQLANSV AFNPQGNEVV DLKSAIVRLG LNAVRTAALS
IVMTQLMRAK GMAEFSEITR GLWEHSIQTS AAARVIARQM PRLNADEAML AGLIHDLGAF
YMLYRATQYQ ELRHRPESIK YLIVNWHESI GVSLLNALGL PAEIVEATAD HDHMRSIPTA
IKTLSEVIYV ANMLCGGHFE WLMQDQPEIP SELAALEEEF GHLRPEIEAL TAEMRDSFS
|
|---|
| |