| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1676 |
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| Symbol | |
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| ID | 3568569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1802412 |
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| End bp | 1805402 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637680143 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_284893 |
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| Protein GI | 71907306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGGA AGTTGTCTTT GCGTTTTGGC GTGTTGCTGG TGACGGCACT ATGTATTTCC
CTGTTCGGAT GGGTCGGTGT AGACCTTCAT CAATCACGTG AGCGTGAATT ACAGGCTGCC
GAGCATCTCG GCCAGACGCT GGGCAAATTG CTGGAGAGCC ATCTGCAGGG GGCGGCGAGC
AAGATTGATC ATCATCTTTC CGATTTTGTG CAGCGTTTCC AGCAGGATGT CGTGGATCGT
GCCTCGCGCG AGCGCCTTGA TGCCGAGTTA CGGCGCTATC AGGCCAATTT CCCTGAAGTG
CATAGTTTTC GCGTAGCCGA TGCAGAAGGG CACTATGTCT ACGATGCCAG TGGAACGCTG
GCTGATGTCA ATATTGGTGA CCGCCCGTAC TTTATTCGTC TCCGTGATGA TCCTGCGGCC
GGATTGGTTA TTTCTCCGCC GCTGGTTTCC CGTGTGACCA ACGATATCGT GATCGTTTTT
GCCCGCCGCT TGCAGGACAA GGCTGGCAAT TTCGCCGGCA TCGTATTGGG CACTTTGCGG
GCCGATTACT TCGAACGTTA CTACCATGGT TTGGATGTCG GCCAGCAGGG CGTCATTGCG
CTGTGGAGCC GGGATATGGA ATTGTTTGCC CGTTGGCCGG AACTGCCCGA CTGGCAAGGT
CGAGCGCTGC TTGATAATCC AATTTCGGCA CGCTTGATGG CGGGGGAAGT GTCTGGCAGT
TTTCGGCGCG CAGGAGGCCT GGATGGCGTG CAGCGGGTAT TCGCTTACCG CGCGATAGAA
GGCTTCCCAT TTGTGGTTAT CGTAGGCCTG GCCGAAGCTG AGGTGCTGGC CGAATGGCGG
CGCCGGGCGG TGGTCTATGC TTTTCTCGGC ATCGTGCTGG CGGTTGCTTT GATTGCGCTG
ATGCGCTCCT GGGGAATGGG GTATCGCCAG GCAGAGGCGC TGGCAGAAAA ACTGGCCAAG
GATTTTGCCG ATAAAACCCG TGAAGGCAGG GCCTTGCTCG ATTCGATTCC CGACCCAGCC
TGGCTGCTCG ATAACGAAGG GCATTATCTG GCGGTCAATG AGGCTTTCTG TCACTACAAA
GGCCTGCCAA TGGAGCAGGT TCTTGGCCAT ACCGTCGATG AGCTGTTCCC GGCAGAGGAG
GCCAAAGTAC TGCGTGACGG TCAACTGGAG GTTTATCGCA AAGGTGGGCC GGTACGCGAG
GTTGTCTGGC TGCATCTGCG CGGCAAGCTG TCGCCGTTCG AGTTTTTGCG CGTGCCGGTA
TACCGTGATG ATGGTCAGCC AAGAGGCCTG GCTGGGGTGG CCTGGGACAT GACTGAGCGC
TATGAGGCCG AGGAGCGCCA GCGCCTGATC ACCCACTTCT TCGATCATGC CAACGATGCT
GTCTTGATCC TTGATGCGGA GCGCCAGGTG GTTACGCTGA ACAAGGCGGT GACGACGATC
AGTGGTTACA GTCTGGACGA TCTCAAGGGC CGGCCGCCGC GCTTCATGCT TGAAGGCTAT
CAGGACAAGG TTTCGCTGGA TGAGCTTTCA TTGGCGCTTA ACGAGCAGGG CGTCTGGCGT
GGCGAGATGA AGGCTGTGCG CAAGGATGGA AGTTTGCTGC CTATCTATTG CAATATCAGT
TCGATTCGCA ACGATGCGGG CAAGGTCGTC AACTGGGCTG TATTTGTCAC CGATCTTAGC
GAGCGCAAGG CTGCGGAGGC ACGCATCGAG TCGCTGACCC ACGTCGATCA GTTGACCGAA
CTGCCGAATC GTCAGGGATT TTCCCGGATC ATGGGGGAGT GGCTGGCAGC GGCAAGGAAA
GGTGCGCTGA TTCTGATCGA CCTTGATCAG TTGAGCCGGG TCAATGATGC TTTCGGGCAT
GCCGCTGGCG ATGCCATGCT GCGCCGCATC AGCGTGCGCT TGCGAAAAAT ACTTCGCGAT
GGTGATTTTC TTGGTCGTCT GGGGGGGGAT CAGTTTGGCG TTCTGCTCGC CCAGGGGATA
CGTCCCGTTG TGGCCGAGGT GGTTGCCCGC AAATTGCTGG ATGCGATTGC TCAGCCAGTG
ATGATCGAAG GAAGCGATAT CGTGACTACG GCGTCGGCCG GCATTTGTCT GCTGGGCAGT
GATGGCCATG ATGTCGCAAG CCTGTTGCGT AATGCCGATA ATGCACTGCA TCACGCCAAG
GACTCGGGGC AAAACGCCTT CCGTTTCTTC TCGGCCGACA TGAACGTCCG TATGGCGGAA
CGTCTGCGCC TGGAGAGCGA TCTGCGCTGG GCGCTGTCAC GGAATGAGCT GCTGCTGCAT
TATCAGCCGC AGGTCGATAT CAATAGCGGA GAAATCATCG GTTTCGAATC CTTGCTCCGC
TGGCAGCATC CGGAACTGGG CATGGTGTCG CCGGTGAATT TCATTCCCTT GGCGGAAGAA
AGCCGGCTGA TCCTGCCAAT CGGTACCTGG GTGCTGGAAG AGGCGTGCCG GCAAAACAAG
GCATGGCAGG ATGCCGGGAT GGCGCCCAAG GTTGTGGCGG TCAACCTGTC TGCGGTCCAG
TTTCATGGTG CCGATATCGT CGCCTTGGTG TCGCAGTCGC TTCAGAACTC TGGGCTGGAG
GCACGTTATC TTGAACTGGA AATTACTGAG AGCGTCATTA TCGAGGACCC GGAGCGGGTG
ATTCGCATCA TGGACGAACT GAAGATGCTG GGGGTTGGGC TGTCGATCGA TGATTTCGGA
ACGGGCTATT CCAGCCTCTC CTACCTGAAG CGCTTCCCGA TCGACAAGAT CAAGATCGAC
CGTTCATTTG TCCGCGATCT GGAGCACAAC ACCAATGATG CAGCGATCAT CCGCATGGTG
ATTGGTATCG CGGAGGAATT AGAGCGCAAG GTGATTGCCG AGGGCGTTGA AACCGTCGAG
CAACTCGAGT TCCTGCGTAG TCATCACTGT GACGAATATC AGGGGTTCTA TTGCAGTCCG
GGGGTGCCGG CCGGAGAAAT CCCCGATCTG GTGGCCAGTC GTCAGGTCTG A
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| Protein sequence | MAGKLSLRFG VLLVTALCIS LFGWVGVDLH QSRERELQAA EHLGQTLGKL LESHLQGAAS
KIDHHLSDFV QRFQQDVVDR ASRERLDAEL RRYQANFPEV HSFRVADAEG HYVYDASGTL
ADVNIGDRPY FIRLRDDPAA GLVISPPLVS RVTNDIVIVF ARRLQDKAGN FAGIVLGTLR
ADYFERYYHG LDVGQQGVIA LWSRDMELFA RWPELPDWQG RALLDNPISA RLMAGEVSGS
FRRAGGLDGV QRVFAYRAIE GFPFVVIVGL AEAEVLAEWR RRAVVYAFLG IVLAVALIAL
MRSWGMGYRQ AEALAEKLAK DFADKTREGR ALLDSIPDPA WLLDNEGHYL AVNEAFCHYK
GLPMEQVLGH TVDELFPAEE AKVLRDGQLE VYRKGGPVRE VVWLHLRGKL SPFEFLRVPV
YRDDGQPRGL AGVAWDMTER YEAEERQRLI THFFDHANDA VLILDAERQV VTLNKAVTTI
SGYSLDDLKG RPPRFMLEGY QDKVSLDELS LALNEQGVWR GEMKAVRKDG SLLPIYCNIS
SIRNDAGKVV NWAVFVTDLS ERKAAEARIE SLTHVDQLTE LPNRQGFSRI MGEWLAAARK
GALILIDLDQ LSRVNDAFGH AAGDAMLRRI SVRLRKILRD GDFLGRLGGD QFGVLLAQGI
RPVVAEVVAR KLLDAIAQPV MIEGSDIVTT ASAGICLLGS DGHDVASLLR NADNALHHAK
DSGQNAFRFF SADMNVRMAE RLRLESDLRW ALSRNELLLH YQPQVDINSG EIIGFESLLR
WQHPELGMVS PVNFIPLAEE SRLILPIGTW VLEEACRQNK AWQDAGMAPK VVAVNLSAVQ
FHGADIVALV SQSLQNSGLE ARYLELEITE SVIIEDPERV IRIMDELKML GVGLSIDDFG
TGYSSLSYLK RFPIDKIKID RSFVRDLEHN TNDAAIIRMV IGIAEELERK VIAEGVETVE
QLEFLRSHHC DEYQGFYCSP GVPAGEIPDL VASRQV
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