| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1672 |
|---|
| Symbol | |
|---|
| ID | 3568565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1797410 |
|---|
| End bp | 1798603 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637680139 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_284889 |
|---|
| Protein GI | 71907302 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.807397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTAGCC TAGCCGGGCG GGACATCCTG CACTCCTGGT CAAAATTCGT CCTGACCGGT
ATCGGCCTGG GTTTGTTGAT TGGTGTAACT CTGACCATGG CTGGCGTTTA TCGCGGTATG
GTCGATGATG CCAAGGCGCT GCTCAACAAC AGCGGAGCCG ACATTTGGGT GGTGCAACAG
GACACCCAGG GGCCGTACGC CGAGTCGTCG AGTCTGCGCG ATGATGTTTA TCGGGCCTTG
CTGGCGTTGC CAGGGATTTT CCGTGCGGCC AATGTCACCT ATTTGACGAT GCAGGTCCGC
CTTGGCAACA CCGATGTTCG GGCCATGGTA GTCGGCTTCG AACCCGGGCA GCCGGGCGAG
CCCGGTTATC TGGTCGCCGG CCGGCAGATT ACTCGCAGCC ATTACGAAGC AGTAGCCGAT
GTGAAGACCG GCTTTCAATT GGGCGACACG ATACGTATCC GCCGCCACGA CTATCGCGTG
GTTGGCCTGA CCCGGCGGAT GGTCTCGTCA GGCGGCGACC CGATGGTCTT CATCCCGCTC
AAGGATGCTC AGGAAGCACA GTTTCTCAAG GACAACGACG CCATTCTCAA CGAGCGGGCC
CGCACCACGA GCAATCCCAC CCTGAACCGA CCCGGCGTAC CGGGATTGCT CGATGCCATC
CTGGCTTCAC AGAACGCCAA TCACAACGTC AATGCGGTAC TGGTTCAGAT TGCCCCAGGC
ACCGAGTCGG AACATGTGGC AAGTGAGATT CGACGCTGGA AGCATCTGCA GGCCTTTACG
CGCACCCAAA TGGAAGAGAT TCTGGTTTCC AAACTTATTG CAACATCGGC CAAACAGATT
GGCATGTTCC TGGTCATCCT GGCCGTCGTC AGCGCCGCCA TCGTTGCATT CATCATCTAC
ACCATGACCC TCGGCAAGAT ACGGGAAATC GCGGTGCTGA AGCTCATAGG CACACGCAAT
CAGACGATTG CCGGCATGAT TTTGCAACAG GCCATGGGCC TCGGCCTCAT TGGTTTTATG
GTGGGCAAAA CCGCCGCAAC AATCTGGGCT CCATTTTTCC CGAAATTCGT CCTGCTCGAA
CCCGGCGATG CGGCACAGGG ATTCCTCGTG GTGATGCTCA TTTGCGCCCT GGCCAGCACG
CTGGCTATCC GAGTGGCTTT GCGTGTCGAC CCGGCAACGG CCATAGGAGG CTAA
|
|---|
| Protein sequence | MISLAGRDIL HSWSKFVLTG IGLGLLIGVT LTMAGVYRGM VDDAKALLNN SGADIWVVQQ
DTQGPYAESS SLRDDVYRAL LALPGIFRAA NVTYLTMQVR LGNTDVRAMV VGFEPGQPGE
PGYLVAGRQI TRSHYEAVAD VKTGFQLGDT IRIRRHDYRV VGLTRRMVSS GGDPMVFIPL
KDAQEAQFLK DNDAILNERA RTTSNPTLNR PGVPGLLDAI LASQNANHNV NAVLVQIAPG
TESEHVASEI RRWKHLQAFT RTQMEEILVS KLIATSAKQI GMFLVILAVV SAAIVAFIIY
TMTLGKIREI AVLKLIGTRN QTIAGMILQQ AMGLGLIGFM VGKTAATIWA PFFPKFVLLE
PGDAAQGFLV VMLICALAST LAIRVALRVD PATAIGG
|
|---|
| |