| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1662 |
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| Symbol | |
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| ID | 3568847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1785396 |
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| End bp | 1787858 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637680130 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_284880 |
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| Protein GI | 71907293 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.29973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATAA AAACAGAAAT AATGACATCT GGGCAATCTG CCACCCAAAA TTGCGCCACG
CCCCACTGGA CGATTCATAC GTTGTTGGGA TGGCTGGTCA TCATCTGCCT TATTCCTGGC
ATCGTCGGGA CCGTCATCTT CTTTTTCCTT GAATACAGCG ATGGTCGTGA CCGCTTGGAA
AAAGACACAA TCCAGACTGC TCGCGCGTTG GTCCAGGCTG TTGATGCCCA TCTGCTCAAG
GCAGAAATTG CAGCCCAATC CTTGTCAACG GCTGGCTCTT TATCAAAGCG CAACTTCGCT
GACTTCCACC GTCGAGCGAC AGAATTGCTG GCCACGAACA AGCAAGGAAG GAACGTTGTA
TTGACCGACC CATCCGGACA GCAGATCGTC AACACGCTTA AACCGTTCGG ACAACTGTTG
CCTAAGCACG GCAACTTCAC CGCTGCTCGC CGTGTATTTG AAACGGGCAA GCCATTGATT
TCAGACTTGT TCATGGGTGA ACTGACCCAA CACCCTGTCA TGAGCATTGA TGTCCCTGTT
CTGACCAATG AAAAAGTGAG CTACGTGCTT AGCATCGGCA TCGATCCAAA TGATTTTAGC
GGCATACTGC TGGCACAACG GCTTCCGGAC GATTGGGTCG CTGCTATTTT CGATACGACG
GGGACAATTG TTTCCCGTAC TCACAACGCC GAGCAGTTTG TAGGACAAAA AGGAACCGCG
GAATTCATTC AGCGTTTCCA AGAATCTCAG GAAGGGGGAA TGGAGACAAC AACCCGAGAG
GGGATTCCTG TCTTCTCCGT ATTCAGCCGT TCAGCAGTCA CCGGCTGGAC CGTCGGCATC
GGTATTCCCC GTAAGTCCCT TGAGGCAGAG CTAAAGCACA AACTCTTGAT CATGGCTTTG
GGCATGATGG CCGTATTTGG ATTTGGGATC GTGCTAGCGT GGTTGATTGG CGGTCGGATT
GCCGTCTCTG TACGAGCATT GCAAGCCCCT GCGAAGGCCT TAGGGGCCGG GGAGCCACTG
CCGGCAACAG TGGTCCATAT CAAGGAAGCA GCCGAAGTGC TAGGAGCGAT GAGCGAAGCA
GCCATTTTGC TGGAACAGCG AACGGCCAGT CTTCAATCAA CCTATCAAGC TCTTTTGGCA
AGAGAGAAAG AACTGCTTGA GGCGCACCGG GTAGGTAAGT TCGGAATCTG GCAGTGGAAT
CCAAAGTCCC ATGAAATTAA CGTTTCCGAG GAAATTCGTC ATATCTATGG GCGTGATGTC
CCCCCCTTCC CGGAACAGCG TGGAACGCTC CTCTCGATCG AGTCCTGGGA ACGCGTGAAT
GCCGCGGCGC AAGAGGCAAT AAAAACGGGG ATTGGCTACG ACCTCAAGTT GCAAGCCTAC
CGTAACGACG GTTCGCAAAT TTGGATTCAT GCAAGGTGCG AGGCCATTCG CGACGCAGAG
GGTGATATCT TGGCGCTGCG TGGAACGGTA CAAGACATTA CTGAACGCAT TGAAGGGGAG
AAGGCGTTAC GCAACAGTGA GATCCGCTTC CGTGCAACCT TTGAGCAGGC AGCGGTCGGC
ATGGCTCACG TTTCGCTGGA TGGGAAGTGG CTACACGTCA ATGACAAAAC CTGCGAAATT
GTTGGCTACT CGCGTGAAAC ACTGCTTGGC CTAACGTTTC AGGAAATCAC CTACCCTCCC
GATCTAAATA CGGATCTCGA CAACCTCCAA AAATTGCTGG CAGGGAGTAT TTCAAGCTAC
AGCATGGAGA AACGCTATGT ACGTCGTGAT GCCACGCTAA CCTGGGTCAA CCTCACAGTT
GCGCTGGTCA GAACATCTGA AGGACAGCCG GACTATTTCG TCTCTGTACT CGAGGACATT
CAATCCCGAA AAGAGGCTGA AGCAGCGCTC GATGAAGCAC GCAAGGTCTA TCGGCAGCAC
CTGGAGCAAC AAGTAGCGGA ACGGACGGAA GCGCTATTGA TGGCAAACCA GGAACTGGAG
CGACTTGCCC ATCAGGATGC ATTGACCAAG CTACCGAATC GATTGGCAGC TAATGAACGA
CTTCGCCAAG AATTCCTGCG TCTAAAACGC ACGGGAAGCC CATATTGCGT ATTCATGATG
GACATTGATC ATTTCAAAAT GATCAATGAC ACCTACGGAC ATGAGACCGG CGACCATGTT
CTTGAACATT TTGCAGTGAC GCTTACGGGA GCGCTCCGCG CCACTGATTT CGTTGCTCGC
TTTGGGGGAG AAGAGTTTAT AGCCCTTATG CCGGACACCG AAATCGAAGG TGCCATGGTT
GCAGCCGAGA AAGTCCGAAT TGCGATCCAT CAAGAGAAAT TCCCTGTGGT CGGATGTGTA
ACCGTTAGTA TTGGCGTTGG AAATTCCCGG ACAGAGGATG CCAATGAAGA CGAGACGGTA
CGTCGGGCCG ATGCTGCACT GTATCGTTCG AAGAAAGACG GGCGAAACCG GGTGAGTTCC
TGA
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| Protein sequence | MTIKTEIMTS GQSATQNCAT PHWTIHTLLG WLVIICLIPG IVGTVIFFFL EYSDGRDRLE
KDTIQTARAL VQAVDAHLLK AEIAAQSLST AGSLSKRNFA DFHRRATELL ATNKQGRNVV
LTDPSGQQIV NTLKPFGQLL PKHGNFTAAR RVFETGKPLI SDLFMGELTQ HPVMSIDVPV
LTNEKVSYVL SIGIDPNDFS GILLAQRLPD DWVAAIFDTT GTIVSRTHNA EQFVGQKGTA
EFIQRFQESQ EGGMETTTRE GIPVFSVFSR SAVTGWTVGI GIPRKSLEAE LKHKLLIMAL
GMMAVFGFGI VLAWLIGGRI AVSVRALQAP AKALGAGEPL PATVVHIKEA AEVLGAMSEA
AILLEQRTAS LQSTYQALLA REKELLEAHR VGKFGIWQWN PKSHEINVSE EIRHIYGRDV
PPFPEQRGTL LSIESWERVN AAAQEAIKTG IGYDLKLQAY RNDGSQIWIH ARCEAIRDAE
GDILALRGTV QDITERIEGE KALRNSEIRF RATFEQAAVG MAHVSLDGKW LHVNDKTCEI
VGYSRETLLG LTFQEITYPP DLNTDLDNLQ KLLAGSISSY SMEKRYVRRD ATLTWVNLTV
ALVRTSEGQP DYFVSVLEDI QSRKEAEAAL DEARKVYRQH LEQQVAERTE ALLMANQELE
RLAHQDALTK LPNRLAANER LRQEFLRLKR TGSPYCVFMM DIDHFKMIND TYGHETGDHV
LEHFAVTLTG ALRATDFVAR FGGEEFIALM PDTEIEGAMV AAEKVRIAIH QEKFPVVGCV
TVSIGVGNSR TEDANEDETV RRADAALYRS KKDGRNRVSS
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