Gene Daro_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1644 
Symbol 
ID3569885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1768791 
End bp1769699 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID637680112 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_284862 
Protein GI71907275 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA CTCATCGCCA GCTGACGATT TTTCGCGCCA TCATGCTGCA CGGCAACTTG 
GGGCGTGCGG CTGCCGCGTG CGCGTCAAGC CAGCCCACTT TGAGTCGCGA GCTGGGTCGT
CTGGAGCAGT TACTGGGGTT TAACCTTTTT GACCGGGTGC GGGGCCGATT ACGACCTACC
GTGCGGGCAC TTGCGCTGAT GCAGGAAGTA GAACGCTCGT TTATAGGCTT GGAACAGATC
GCAGCGCGCG CCAGCGAATT GCGCACGCAA GCGACAGGTC ACTTGCGCAT TGCGTGTTTG
CCGGCATTGG CCCATGCCTT GGTACCCCGC GCACTGGTAT ATCTCTCACA TGCACATCCT
GAACTAGGAG TCAGCGTGCA TCCCTTAGAG TCGCCCTGGC TGGAGCAAGC CATGAGTGAA
CAGCGTTTTG ACCTGGGACT GAGTGAAACC CAAGAGGCAC CTGCTGGAGT TGCCTTGCAG
CCCTTACTGA AAGTCAATGA AGTGGCTGTT TTGCCACGTG ATCACAGCCT GTGCCGCAAG
GCGCGACTGC AACCACGCGA CTTTACAGGC GAGCGCTTCA TCAGTCTCGC GGTTGGCGAC
CCGTATCGAA CCGCCATTGA TGCGATGTTC GAGGACGCTA AAGTACATCG CGCAACCCTG
CTTGAAACCA CGAGCGCAGT GGCCGTCTGC GCCATGGTGC GTCAGGGCCT GGGCGTTGCC
ATCGTAAACC CGCTCACCGC ACTGGAACTC AGCGGACCGG ACCTAGTAGT GCGGCCGCTT
ACCGTTGCCA TCGGTTACCA GGTGAATATG CTTCTTCCGG ACATCGCAGC TCCGCACCCC
TTGCAGGGCG TTCTCGCAGA CGCCGTACGC AAGGCCTGTG CCGCCTTGAA CAAGCATCAC
TCGCTATGA
 
Protein sequence
MNLTHRQLTI FRAIMLHGNL GRAAAACASS QPTLSRELGR LEQLLGFNLF DRVRGRLRPT 
VRALALMQEV ERSFIGLEQI AARASELRTQ ATGHLRIACL PALAHALVPR ALVYLSHAHP
ELGVSVHPLE SPWLEQAMSE QRFDLGLSET QEAPAGVALQ PLLKVNEVAV LPRDHSLCRK
ARLQPRDFTG ERFISLAVGD PYRTAIDAMF EDAKVHRATL LETTSAVAVC AMVRQGLGVA
IVNPLTALEL SGPDLVVRPL TVAIGYQVNM LLPDIAAPHP LQGVLADAVR KACAALNKHH
SL