Gene Daro_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1628 
Symbol 
ID3568461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1748275 
End bp1748814 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID637680095 
Producthypothetical protein 
Protein accessionYP_284846 
Protein GI71907259 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value0.511359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.669453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCT CGCCAGTCAA ACATCTCGAA TCGTTCATCT TCGCCAGTCG CTGGATCCAG 
GCCCCGCTCT ACCTCGGCCT GATCGTCGCC CAGGTTGTCT ATTGCTGGCT GTTCATGGTC
GAACTGAGCC ATCTGGTTCA TAGCGCCTTC GATGCAGCTC ACCTCAGCGA AACTGACGTG
ATGCTTGTCG TCCTTGGCCT GATCGACGTC GTGATGATCG CCAATCTGCT GGTCATGGTT
ATCGTCGGTG GTTACGAGAC ATTCGTTTCC CGCCTCGACC TCGATGACCA TCCGGATCAG
CCGGAATGGC TTTCCCACGT CAATGCCGGC GTGCTCAAGA TCAAGCTGTC GACGGCCATC
ATCGGCATCT CGTCAATCCA CCTGCTGAAG AGCTTCATCA ATGCCGCCAA CCTGTCCGAG
CACACGCTGA TGTGGCAGGT CATCATTCAC GTTGTATTCC TTTTCTCCGC CCTGGCCATG
GCGCTTGTCG ACAAGACCAT GACCCAGACC CTCGCCCTTC AACACCAGAA ATCCCACTGA
 
Protein sequence
MMRSPVKHLE SFIFASRWIQ APLYLGLIVA QVVYCWLFMV ELSHLVHSAF DAAHLSETDV 
MLVVLGLIDV VMIANLLVMV IVGGYETFVS RLDLDDHPDQ PEWLSHVNAG VLKIKLSTAI
IGISSIHLLK SFINAANLSE HTLMWQVIIH VVFLFSALAM ALVDKTMTQT LALQHQKSH