| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1622 |
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| Symbol | |
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| ID | 3568455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1739474 |
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| End bp | 1741882 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637680089 |
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| Product | PAS |
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| Protein accession | YP_284840 |
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| Protein GI | 71907253 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.2135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.458803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGAA ATGAGGAAAT CGTTAAGAGG TTGTTCCCTA GGTATCTGGC CCTGGCCCTC
ACATTGCTCC TCGTCATGGG CAATACGCTG CCGCCGACCA AATTCTTCTC TTCCCCGGAA
CACTACCTCC CGCTACATAC CGTTCTCGAA TTCCTTGCCA TGACCATTTC GGCAATGGTT
TTCAGCCTCT CGTGGAACCT GAGAACGCAA CCACGGAGCA GCAATAACCT GCTGTTGGGA
ATTGGCCTGA TGATTGTCTG CATGATCGAC ATGGCTCACA CCCTGTCGTA TGCCGGCATG
CCAAAGTTGG TAACACCCAG CTCACCGGAA AAGGCCATCA ATTTCTGGCT AGCAGGACGC
TTTGTTGCCG CGATATCGCT TCTCGCCTAC GCGACCTTGC CCGAAAAAAC ATGGAATGCT
CTGGTTTCTG CACTGGCCTT ATTCGGCGGG CTTTTATTTG CAGCGCTGGT TTGGTGGATC
GGTCTTTTTC ATGCAGACAC GCTGCCCTGC ACATTTATTC CAGGAGAAGG CCTGACTGTA
TTCAAAATTG CCGCCGAATA TAGTTTGAGC GCTTTTTACG CCATCGCAGC CCTGCTCCTG
TATTTGCGCG GCCAGAAAAC ACGTCGCCCC GAGCTTTATT GGGTTGCCGC CGCATCCTGG
ACTCTCGGCC TTGCTGAGAT GTTCTTTACG CTCTATGTGG ACGTCACAGA CCTCTTCAAT
CTGCTTGGAC ACATCTACAA GGCCTTTGCT TACTGGATGA TTTATCGGGC ACTCTTCGCG
GAAGGTGTGC GTGCACCCCA ACATGCACTA AGCCGACAGG CGCAACGACT ATCTGCCATT
CTCGACGGCA CAAACGTCGG TACGTGGGAA TGGAATATAC AGAACGGCAA AGTCATTATT
AACGAGCGCT GGGCCAACAT TATCGGCTAC GACCTCGCTG AAATGCAGCC AGTGAATTTT
CAGACATGGG TCGGGTTTGT CCACCCAGAG GATATTCAGA CATCCCAATT TTTGCTTGAA
CAGCATTTTT CCGGAGAAAT ACCCTATTAC GAATGTGTTG TCCGCATGCG GCACAAGGAT
GGTCACTGGG TTTGGGTACT CGACCGCGGC CGCATCGCAA CCTGGGCAGC CGACGGCAAA
CCGCTCTGGA TGTTTGGCAC CCACCAGGAC ATCACGGCAC AAAAAATGGC TGAGCAGGAA
TTGCTCGCTC ATCGTGACCA TCTGGAAGAA CTGGTCAGTA TCAGAACGCA TGATCTTTCT
ATCGCCAAAG ATGCCGCCGA TGCCGCAAGT CGGGCAAAAA GCGCCTTCTT GTCCAACATG
AGTCACGAGT TGCGGACCCC GCTACACGGC ATTCTTGGTT TGGGTAATAT CTTGAAGGGC
AAGATCAATG ACCAGCATAG CCGGTTACTG GTCGCCAAAT TACTGACCAC AGCGTCACAC
ATGAATGATG TCGTCAATAA CGTCCTCGAC CTGGCACGAA TTGAGGCGGG CCGCTTTGTA
ATCAAAAACG CTGATTTCTC GACCGCTACG CTAAAAGAAA AACTGGATTC GATCTGCGCC
ATCAACGCCC AAGCCAAAGG ACTTGAATAC AAAGCGAATT TTGATTTACC TCCCCGAGTT
CACGGCGACT CAGTACAGAT CCTTCAGGTG CTGATCAACA TTGTCGGCAA CGCAATCAAA
TTTACAGAAC ATGGCAGCAT CCACGTCTCC GCTTTTGTTC TCTCTGAAGA AAGCTCCCGC
TTGCGGCTGT GTTTTGAAGT CCGCGATACC GGCATAGGTA TTCCTCCAGA AAAACTGGAA
AGCATATTTG AAGACTTCGA ACAAGCTGAT GGCGGCATCA ATCGGAAATA TGGAGGCTCG
GGCCTGGGCC TTGCCATCAC ACGCCGACTT GTGCAAATGA TGGAAGGAGA AACACAGGTT
GAGAGCCAGC CAGGCATTGG CAGCCTCTTC CGCTTTGAAA TCAATGTCGG AAAAGTCGCC
AGCCATGATA CCGGCGGTGC TACGGAAGCC TCACCGGCTC CCCCAGTAAA CCTCCTGGGG
GCACACATAC TGGTGGTTGA TGACGAGCCA CTAAACGGCA TGATATTGAC CGACATTCTC
GCCGAGCATC AGGTCAACGT ATCGCTTGCA GAAAATGGCC AAAGTGCCAT CGATCTGGCC
AAGACGGAAC ATTTCGACCT GATCCTGATG GATATGCAAA TGCCTGTCCT CAACGGACTG
GCTGCGACTG AACAAATTCG CCAGCTGCCA GGGTATGAAA CAACCCCCAT CATTGCCCTG
ACGGCAAATG TTCAGCCAGA GCACAAGGCA CAGGCCGAAG GAGCCGGGAT GAACGATTTC
CTGGGAAAAC CATTCAATGG CGAGGTACTT CTGGCAAAAA TCAGCTACTG GCTACAAGCA
AGTAAATAG
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| Protein sequence | MQGNEEIVKR LFPRYLALAL TLLLVMGNTL PPTKFFSSPE HYLPLHTVLE FLAMTISAMV
FSLSWNLRTQ PRSSNNLLLG IGLMIVCMID MAHTLSYAGM PKLVTPSSPE KAINFWLAGR
FVAAISLLAY ATLPEKTWNA LVSALALFGG LLFAALVWWI GLFHADTLPC TFIPGEGLTV
FKIAAEYSLS AFYAIAALLL YLRGQKTRRP ELYWVAAASW TLGLAEMFFT LYVDVTDLFN
LLGHIYKAFA YWMIYRALFA EGVRAPQHAL SRQAQRLSAI LDGTNVGTWE WNIQNGKVII
NERWANIIGY DLAEMQPVNF QTWVGFVHPE DIQTSQFLLE QHFSGEIPYY ECVVRMRHKD
GHWVWVLDRG RIATWAADGK PLWMFGTHQD ITAQKMAEQE LLAHRDHLEE LVSIRTHDLS
IAKDAADAAS RAKSAFLSNM SHELRTPLHG ILGLGNILKG KINDQHSRLL VAKLLTTASH
MNDVVNNVLD LARIEAGRFV IKNADFSTAT LKEKLDSICA INAQAKGLEY KANFDLPPRV
HGDSVQILQV LINIVGNAIK FTEHGSIHVS AFVLSEESSR LRLCFEVRDT GIGIPPEKLE
SIFEDFEQAD GGINRKYGGS GLGLAITRRL VQMMEGETQV ESQPGIGSLF RFEINVGKVA
SHDTGGATEA SPAPPVNLLG AHILVVDDEP LNGMILTDIL AEHQVNVSLA ENGQSAIDLA
KTEHFDLILM DMQMPVLNGL AATEQIRQLP GYETTPIIAL TANVQPEHKA QAEGAGMNDF
LGKPFNGEVL LAKISYWLQA SK
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