| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1614 |
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| Symbol | |
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| ID | 3568447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1730792 |
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| End bp | 1733413 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637680081 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_284832 |
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| Protein GI | 71907245 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.499982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTATTTT TTGCCAAGGC GACGAAGGCT AAGCAGGCGG CAATGAGCGT CAGTTCGCGT
GATCGCTTTA TTCTATTGGC GACGGCTGGT TACACAGTTT TCTCCCTGCT GTGGATATTC
CTGTCCGACC AATTGATGTC GGCATTTGCC GACATCAATT CCATGGTTTG GCTATCAACA
GCCAAGGGAA TATTTTTTGT CATTGCGACA GCCGGGATGT TTTACCTCGC CATGCGTGCA
GTGCCCACAG ACAATGCTGC ACTTAGCGAA GGCTTACTGA AATCACTGCT TGATCGTTCA
ATGCAGGGAC GATGGCCACG TTGGGCGGTC TATATTTTCG CTATTCTGGT TACGCTGCTG
ATGTTGCTGG TGCGGGCAAG TTTGCCGCTC CCATTCGACG AACGGCCAAT GCTCATTTTG
TTCATGTTGC CGATCATTCT CAGCGCCTTG CTGGGGGGCT TGGGGCCAGG GCTTTTCTCT
ACGGCATTAT CGGCGCTGGG TGTGAATTTC TTGTCGATTG CTCCTCTGCG CGGCCTTTAT
ATCGCCTCCA GTTACGATCT CTTTCATTGG AGTTTCCTGG TCATTAACGG TGTCGCCATC
AGTTTGCTCA GTGAAGTGCT ACGTAAGGCG CGGAGCAAGG CAGAGGTCAA CCGCCAACTC
CTTGACACGA TAGTGTCGGG TACATCGGAT GCCGTCTTCC TGAAGGATGC CCAAGGGCGT
TACCTCTTGG CAAATGCCGC TACAGCAGGC TTTGTTGGCA AGGCGCAAGA AGAAATCATT
GGTCAGGATG ATACTTTCCT GTTTCCGGAA GAAACGGCCC GTGATTTGAT GACCAGTGAT
CGTGTGATCA TGCTGGCAGC TCGAAACACA ACTCACGAAG AGTGCCTCAG AACGCTGGAT
GGCAAGGAAA TGGTTTTCCT GGTGACCAAG GGGCCGGTTT TTGACCACCA GGGGCGTGTT
GTCGGGCTCT TTGGTATTTC GCGCGAAATC ACCGAGCTCA AGCGGGCAAT GGCGGCATTG
GTGGCCAGTG AAGCGGCCCT GAAACTGGCT CAACGCCAGG CCGGTATTGG TAACTGGACA
TGGAATATTG GAACTGGCGA GCATTCATGG TCCGAAGAGG TCTATCGTAT CTATGGCCAT
GATCCTCGTT TGCCGCCCCT TGGTTATCCC GAGGTTAGTC AATACTTTAT GCCAGAAAGC
TGGAGGCTGC TTTCAGCTAC GATTGAGAAA TGCCTGGTTG ATGGCGAACC CTACGAATGC
GATGTCGAGC TAATGTCACC GCCCGCTACT AGCTGTTGGG TGGCTGTGCG CGGAGAGGCG
ACACGTAGGC CTGATGGGAC GATCATCGAC CTCCATGGCA CGATTCAAGA CATTACCGAG
CGCAAGCGGA GTAGCAAGGA ATTAGAGCAA TACCGCCATC ACCTTGAGGA GCTGGTCGAG
AGCCGCACCA CTGAACTGGC GACGGCGAGA GCTTCGGCCG AGGCTGCAAC ACGGGCCAAG
AGCGCTTTTC TGGCGAACAT GAGCCACGAG ATACGAACGC CGATGAATGG AATCCTCGGC
ATGGTTCATC TGATGCGACG TGCCGGGGCA AGTCCGGCGC AGCTTGAGCA GCTCGACAAG
ATTGCCAGCT CCGGGACACA CCTGCTTGTC ATCATCAACG ACATTCTCGA TTTGTCCAAG
ATTGAGGCCG GAAAACTCGT TCTGGAACAG GAAAATTTTT TGTTGTCCGA GGTGGTGAAT
ACGGCCTTGG CGGTCATTGC CGGGGCTGCT GCAGCCAAGG GGCTGACGGT GAATGCTGAT
GTGTCCTCTA TTCCACAGGC GTTGCGTGGC GACCCGACCC GGCTTTCACA GGCGCTTGTT
AATTATCTAG GCAACGCGCT CAAATTTACC GAGCGAGGCA GCATTTCTCT GAAAGGCAGC
GTCGTCGAAG AAACAGAGAC GGATTACCTG CTGCGCTTCG AAGTCAGCGA TACCGGCATT
GGCATGACGG CCGAGCAGCA ATCGCATTTG TTCATTCCTT TCGCTCAGGC CGATAGTTCT
ACGACGCGTA AATTTGGCGG CACAGGCCTA GGCTTGGCCA TTAACCAGCA CATTGCTCAG
ATGATGGGGG GGGAGGTCGG CGTGAGTAGT ATCCCCGGGC AAGGCAGTTC CTTCTGGTTG
ACCGTGAGAC TTGGCAAAGG GCGCTCGACT GGGCAGGCAA AGCCGACTCT CGCGAGCGAC
CCCGAGGAGG TTCTTGTGAG TGAGCATCGT GGTCGACGTG TGTTGCTGGT TGAAGATGAA
CCGATCAATC AGGAGGTAGC TGGAGAGTTG TTGCGAGAAG TTGGACTGGA GGTCGAATTG
GCAGCCGATG GCTTACAGGC CGTGCAGCTG GTCGTGGAGA ATGACTACGA CGTGATCCTG
ATGGATATGC AGATGCCTGA AATGGATGGT CTGGAGGCAA CAAGGGCAAT TCGCAAACTG
CCCGGACGCC AGACTGTTCC CATTCTGGCC ATGACCGCCA ATGCCTTTGC CGAAGACCGT
GAGAGATGCA TGGCTTCCGG TATGAACGAC TTCATTCCCA AACCGGTCAA TCCGGATGTC
CTTTACGCGA CGCTGCTGCG CTGGCTGACG GTTCGCAGCT AA
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| Protein sequence | MLFFAKATKA KQAAMSVSSR DRFILLATAG YTVFSLLWIF LSDQLMSAFA DINSMVWLST
AKGIFFVIAT AGMFYLAMRA VPTDNAALSE GLLKSLLDRS MQGRWPRWAV YIFAILVTLL
MLLVRASLPL PFDERPMLIL FMLPIILSAL LGGLGPGLFS TALSALGVNF LSIAPLRGLY
IASSYDLFHW SFLVINGVAI SLLSEVLRKA RSKAEVNRQL LDTIVSGTSD AVFLKDAQGR
YLLANAATAG FVGKAQEEII GQDDTFLFPE ETARDLMTSD RVIMLAARNT THEECLRTLD
GKEMVFLVTK GPVFDHQGRV VGLFGISREI TELKRAMAAL VASEAALKLA QRQAGIGNWT
WNIGTGEHSW SEEVYRIYGH DPRLPPLGYP EVSQYFMPES WRLLSATIEK CLVDGEPYEC
DVELMSPPAT SCWVAVRGEA TRRPDGTIID LHGTIQDITE RKRSSKELEQ YRHHLEELVE
SRTTELATAR ASAEAATRAK SAFLANMSHE IRTPMNGILG MVHLMRRAGA SPAQLEQLDK
IASSGTHLLV IINDILDLSK IEAGKLVLEQ ENFLLSEVVN TALAVIAGAA AAKGLTVNAD
VSSIPQALRG DPTRLSQALV NYLGNALKFT ERGSISLKGS VVEETETDYL LRFEVSDTGI
GMTAEQQSHL FIPFAQADSS TTRKFGGTGL GLAINQHIAQ MMGGEVGVSS IPGQGSSFWL
TVRLGKGRST GQAKPTLASD PEEVLVSEHR GRRVLLVEDE PINQEVAGEL LREVGLEVEL
AADGLQAVQL VVENDYDVIL MDMQMPEMDG LEATRAIRKL PGRQTVPILA MTANAFAEDR
ERCMASGMND FIPKPVNPDV LYATLLRWLT VRS
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