| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1600 |
|---|
| Symbol | |
|---|
| ID | 3568608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1716322 |
|---|
| End bp | 1717656 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637680068 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_284819 |
|---|
| Protein GI | 71907232 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.0970446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.868802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA CGATGGGGCT GGCCCTGGCG GTCGGCACGG TGGTGGTCAT CCTGCTGCAG
GTGGCCTTGC TGTTGCGGGA TAACCGCAAA CAGGGCGATG CAGAGCACTT CCGGACGCTG
CTGGACGCGC AGGAAAAAGG CTTGATGCGC CTTGAGCGCG AATTGCGCGA GGAGCTGGCC
CGGGGCCGGC GCGAGGATGC CGAAGAGGCA TTCCGCGACC GCGAGGAGCG AGCCCAATCA
GCCAATCTGC TGGGGCAGGC GATCACCACA CAGGTTGGCC AGTTTGGTAC CTTGCAGGCC
GAGCGCCTGG AGGCCTTTGC CCGTGAATTG AATCGTTTTT CGCTGGGGCT GGACGAGCGT
TTCGAGCGCC TCAAAACGAC CGTCGAGGGG CGCTTGACTG CCATTCAGAC GGACAATGCC
AACAAGCTCG AGGAAATGCG CCGTACCGTA GACGAGAAGC TGCATGCGAC TTTGGAGCAG
CGTCTTGGCG AATCCTTCAA GCTGGTTAGC GACCGACTGG AGCAGGTGCA CCGTGGTCTT
GGCGAAATGC AGACGCTGGC AGCCGGTGTT GGCGACTTGA AGCGCGTGCT GACCAATGTG
AAGACGCGTG GTACCTGGGG GGAAGTCCAG CTCTCAGCGC TGCTTGAACA GTTGCTGACG
GCCGATCAGT TTGCTTCCAA TGTTGCGACC CGCCCGGGTA GCAACGAGCG CGTCGATTTT
GCCATCCGCC TGCCGGGCAA GGACGACGGT GCAGTCGTCT GGCTGCCGAT CGACGCCAAG
TATCCGATCG AGGACTACCA GCGTCTGCTT GATGCTCAGG AGCGAGCAGA TCCGGCGGCG
GTCGAGGAGG CTTCGCGGGC CATCGAAACG CGGCTGAAGA GCGAGGCCAA GAGCATCCAC
GAGAAATACG TCTCGCCGCC GCATACGACT GATTTCGCCA TGCTCTACCT GCCGCTTGAA
GGCCTCTATG CCGAGGCGCT GCGCCGGCCG GGGCTGGCTG AGACGCTGCA GCGCGATTTT
CGGGTCAGTC TGGCCGGTCC GACGACCTTG GCCGCGCTGC TTAACAGCCT GCAGATGGGC
TTCCGTACGC TGGCTATCGA GCAACGTTCA GCTGAGGTCT GGGCCGTGCT TGGTGCAGTG
AAGACCGAGT TCGGCAAGTT TGGCGAGGCG CTGGCGCATA CCCGGAAAAA GCTGGACGAG
GCAAGCAACA GTATCGCCAA GGCGGAAACC AGGACCAGGC AACTGTCGCG CAAGTTGAAA
GAAGTCGAAG CGCTACCGGC GGCAGAATCT GAACAATTGA TCGGTGTGGT GGAATTTGAT
GGTGAAGACG AGTGA
|
|---|
| Protein sequence | MSETMGLALA VGTVVVILLQ VALLLRDNRK QGDAEHFRTL LDAQEKGLMR LERELREELA
RGRREDAEEA FRDREERAQS ANLLGQAITT QVGQFGTLQA ERLEAFAREL NRFSLGLDER
FERLKTTVEG RLTAIQTDNA NKLEEMRRTV DEKLHATLEQ RLGESFKLVS DRLEQVHRGL
GEMQTLAAGV GDLKRVLTNV KTRGTWGEVQ LSALLEQLLT ADQFASNVAT RPGSNERVDF
AIRLPGKDDG AVVWLPIDAK YPIEDYQRLL DAQERADPAA VEEASRAIET RLKSEAKSIH
EKYVSPPHTT DFAMLYLPLE GLYAEALRRP GLAETLQRDF RVSLAGPTTL AALLNSLQMG
FRTLAIEQRS AEVWAVLGAV KTEFGKFGEA LAHTRKKLDE ASNSIAKAET RTRQLSRKLK
EVEALPAAES EQLIGVVEFD GEDE
|
|---|
| |