Gene Daro_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1595 
Symbol 
ID3568603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1710294 
End bp1711091 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID637680063 
ProductBeta-lactamase-like 
Protein accessionYP_284814 
Protein GI71907227 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones85 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAA TTTCGTTCAT TCCCGCGTTC AAGGATAATT ACATCTGGCT GCTGACCCGG 
GGCAAGCGTG CTTTCGTCGT CGACCCCGGT GATGCTGCGC CTGTGCTGGC AAGGCTGGAG
GCTGGCGGGT TGATGCTGGA AGGCATCCTG ATTACCCATC ACCACGCCGA TCATCAGGGG
GGCGTCGCCG AACTGAAAGC GCGCTGGCAA GCCGAGGTTT ATGCGCCGGG CAACGAGTCT
ATCACAGGCT GCTCTTGTCC CCTGAGTGGT GGTGAAAGCA TCGATGTGCT TGGTCAGAAA
GTCACGGTTA TGGCGGTTCC TGGCCATACA CTGGGGCACT TGGCCTATTA CGCGCCGGGG
GCGCTTTTGT GCGGCGATAC CCTGTTCGGT GCCGGTTGCG GTCGACTGTT CGAAGGAACG
CCAGCCCAAA TGTCTGCCTC ACTGGACAGC ATCGCCGCCT TGCCAGGCGA CACCTTGATC
TACTGCGCGC ATGAATATAC GGAGATGAAC CTGCGTTTTG CGCTTGCTGT CGAGCCGAAT
AATCAGGCGT TACAAGCTCG TGTGGCCAAG GTGGCTGCGT TGCGTGCTGC CGGCTTGCCT
AGTGTGCCGT TGATTCTGGC TGAAGAAAAG GCGACCAATC CCTTCCTGCG TTGCCATGAA
GCGGCAGTGG TTGAGGCTGG TTTGCAGCAC GCTGCTTCCT GCTTGCTCGG GCACGCTGCC
CAGCAAGGAG CGGACATTGA AGATCGTTCA AAAACGGCAA TTTTTGCGGC TATCCGCAGT
TGGCGTAACA CCTTCTAG
 
Protein sequence
MLEISFIPAF KDNYIWLLTR GKRAFVVDPG DAAPVLARLE AGGLMLEGIL ITHHHADHQG 
GVAELKARWQ AEVYAPGNES ITGCSCPLSG GESIDVLGQK VTVMAVPGHT LGHLAYYAPG
ALLCGDTLFG AGCGRLFEGT PAQMSASLDS IAALPGDTLI YCAHEYTEMN LRFALAVEPN
NQALQARVAK VAALRAAGLP SVPLILAEEK ATNPFLRCHE AAVVEAGLQH AASCLLGHAA
QQGADIEDRS KTAIFAAIRS WRNTF