Gene Daro_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1592 
Symbol 
ID3568736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1708387 
End bp1709103 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID637680060 
ProductDNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit 
Protein accessionYP_284811 
Protein GI71907224 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAGA TCGTTCTCGA CACTGAAACC ACCGGCCTAG ACCCCCGCTC AGGCCACCGT 
ATCATCGAAG TGGCGTGCAT CGAGATGGTG AACCGCCGCT TTACCGGTCA CCACCTGCAC
AAATATATTA ACCCTGAGCG CGAAATCGAC GAAGGCGCCC AGGCGGTGCA CGGCATCACC
CTTGAATTCC TGGCCGACAA GCCTAAATTC GCCGACATCG CCGACGAGTT TCTTGAGTTC
ATCAACGGCG CCGAATTGAT CATCCACAAC GCGCCTTTCG ACATCGGCTT CCTCAATGCC
GAACTCGACC GGCTCGGCCG GGTGCCGGTC GGCACCATTT GCAATGGCGT CATCGACACC
CTGCGCATGG CCAAGGAGTT GCATCCCGGC AAGCGCAACA GCCTTGATGC GCTGTGTGAA
CGCTACGAGA TCGACAATTC GAGCCGGACC CTGCACGGCG CGCTGCTCGA TACGGAATTG
CTGGCCGACG TTTTCCTGGC CATGACCCGA GGCCAGAACA GCCTGATGAT CGAACCCGAT
GCAGAGCCAC GTCCGAACAT CGGCGCCGAC GGCCAGGTTC GCGAACGCAA GCCACTCAGC
GTACGCCGCG CCGCGCCGGA GGAAATCGCC GAGCACGAAA CGGTATTGGC GGCAATCGAC
AAGGAATCGA AGGGTGCCTG CATCTGGTTG CCCAAGCCAG AAACCGAAGC AGCCTGA
 
Protein sequence
MRQIVLDTET TGLDPRSGHR IIEVACIEMV NRRFTGHHLH KYINPEREID EGAQAVHGIT 
LEFLADKPKF ADIADEFLEF INGAELIIHN APFDIGFLNA ELDRLGRVPV GTICNGVIDT
LRMAKELHPG KRNSLDALCE RYEIDNSSRT LHGALLDTEL LADVFLAMTR GQNSLMIEPD
AEPRPNIGAD GQVRERKPLS VRRAAPEEIA EHETVLAAID KESKGACIWL PKPETEAA