Gene Daro_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1587 
Symbol 
ID3568731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1704658 
End bp1705320 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content55% 
IMG OID637680055 
Productcytochrome c, class I 
Protein accessionYP_284806 
Protein GI71907219 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.0500716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCTT ACTTACGAAT TCCATTTTTA CTGGCTGCGC TGATGGCGAG CCCGTCGGTG 
TTTGCTGCCG ATCTTGAAAA AGGCAAGGAA ATCAACGGCA CCTGTGCCGC TTGCCATAGC
GATAACGGCC AGGGGGGCAA GCGGGGGGAA TACCCGCGCA TCGCCGGCCA GCAAGTCAAG
TACATCGAAA GCCAGCTGAA AAATTTTCGG GCACGTACGC GGGTCAATAT TCCGATGTTT
CCCTACACCC AGGAGCGGGA GTTGTCGGAT TCGGATATCA AGGATATTGC CGCCTATCTG
AACGGGATCG AACTGGATAC CAAGATGCCC ACCTACACCG GCAAGGAGGA TGCGCTGACC
AAGTTGCTGA TGGCTGATAA AGTGATGATC ATCCCGCGCG TCGAGGGAAA CTTGGCCAAC
GGAGAAAAGA TATTCCAGAA GCAGTGTGCC GCCTGTCATG GCAAGGCTGG CAAAGGGCGC
GGCATGTTCC CGATGCTGGT CGGGCAATAC ACGAATTATC TGCAGCGTCA GGTCGATCTT
TATCTGAAGG GCGACCGGCC GCATGACGAA GAGGGTACGA TCGGCGTGCT GAACGACCTG
AAGGCTCAGG ACATTCAGGA TATTCTGGCT TACCTCACCT CAATTCAGGA ACCGAAGGAA
TGA
 
Protein sequence
MRSYLRIPFL LAALMASPSV FAADLEKGKE INGTCAACHS DNGQGGKRGE YPRIAGQQVK 
YIESQLKNFR ARTRVNIPMF PYTQERELSD SDIKDIAAYL NGIELDTKMP TYTGKEDALT
KLLMADKVMI IPRVEGNLAN GEKIFQKQCA ACHGKAGKGR GMFPMLVGQY TNYLQRQVDL
YLKGDRPHDE EGTIGVLNDL KAQDIQDILA YLTSIQEPKE