Gene Daro_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1580 
Symbol 
ID3568724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1698053 
End bp1699441 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content56% 
IMG OID637680048 
Productsensor histidine kinase 
Protein accessionYP_284799 
Protein GI71907212 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.0943053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA AAACTAACCC TCCGCGACAA CGTGAGCCCT TGTCGCTGAG ACAGCGCCTG 
ATCCTGGCGC TGTTGACTCC GCTGATCGTG ATACTGGCAT CGTCCTCGAT CTTCGATTAC
CAGCTGGCGA AAAAGACAGC GAATCGCGCC CATGACCAGG CGCTGGCCGA CAATGTCTTC
GATCTGGAAT CGCATATCAA AAGACAAAAT CCGTCGCCTA CCCTCGACCT GACCGAAGAA
GCCGAAGCCA TGCTGCGTAG CAACGCACCC GACATGCTGT ATTTTTCGGT CAGCGACTCG
AGTGGAAAAG TACTGGCGGG CGATACCGAC CTTCCCAAGA CGCACTCCCA AAAAAGCGAA
CAGGTCGAGT TCCGTGATGG AATCTATCAG GACAAGGCTG TCAGAATTGC CTCCCATCGG
GCCAACATCA GGAACCGGGA GTTTCAGATC GTGGTTCTGG AAACCACTGA AAAACGCCAA
CAGGCCAGCT CAAGGATTCT GACGGCGATG GTCATTCCCA ACCTCGCCGT CATCCTGGCC
ACCATGCTGG CCGTAATCTT TGGTGTCCGG CAAGGCCTCC TCCCCCTGCG CGAGGTCGAG
CACGATATTG CCGTTCGCTC AGCCAATGAC CTTCACGAAA TCGAGCTTTC CGGAACCCCC
TCCGAAATCC GCCCGATGCT CCACCGTCTC AATGAGCTTT TTGCGCTCGT GCGCGAATCA
GTCGAAGTTC AGCAGCGCTT CATCGCCGAC GCTGCGCATC AGTTACGTAC CCCCCTGGCC
GGCCTGCAGA CACAACTGGA TTTGGCCACC TCCGAAGGCG CTTTTAGCAA CAACGTTGAG
CGCCTCCAGT TGATCGAAGA ATCGACTGCG CGTATCGGCC ATTTGCTCAC CCAGTTGCTC
ACCTACGCCA GGGCTGAAAC GTCAAACGCC ATCAAGGCAA ACTTTGAGCC CGTACAACTC
AACCTGCTGG CCGAAAATTC CGCTTCGATC TTCCTTGATG CGGCCTTGGC AAAAAACATC
GATCTGGGCT TCGAAATATC GCCGACGACG ACCCTGGGAT TCCCCTGGAT GCTGCAGGAG
GCACTATCCA ACCTGATCGA CAACGCCATC CGCTATACCC CGCCCGGCGG CATCATCACG
GTTCGCAGCA GTAGCGCAGA CAAGCAAGCC TGCATTGAAG TCGAAGATAG CGGCCCCGGC
ATTCCTGACG AGCATCTCAA GCACGTATTT GAACGCTTCT ACCGCATCCC CGGCTCCCCG
GGTCATGGGT GCGGACTAGG GCTGGCGATA GTCAGCGAAA TTGTCCAGCT TCATGGTGCC
AGAATCGATC TCGAAAAAAG CCCGCAGGGT GGCTTGCGAA TTCGCATCAC TTTTCAAGCG
CTGGACTAA
 
Protein sequence
MQPKTNPPRQ REPLSLRQRL ILALLTPLIV ILASSSIFDY QLAKKTANRA HDQALADNVF 
DLESHIKRQN PSPTLDLTEE AEAMLRSNAP DMLYFSVSDS SGKVLAGDTD LPKTHSQKSE
QVEFRDGIYQ DKAVRIASHR ANIRNREFQI VVLETTEKRQ QASSRILTAM VIPNLAVILA
TMLAVIFGVR QGLLPLREVE HDIAVRSAND LHEIELSGTP SEIRPMLHRL NELFALVRES
VEVQQRFIAD AAHQLRTPLA GLQTQLDLAT SEGAFSNNVE RLQLIEESTA RIGHLLTQLL
TYARAETSNA IKANFEPVQL NLLAENSASI FLDAALAKNI DLGFEISPTT TLGFPWMLQE
ALSNLIDNAI RYTPPGGIIT VRSSSADKQA CIEVEDSGPG IPDEHLKHVF ERFYRIPGSP
GHGCGLGLAI VSEIVQLHGA RIDLEKSPQG GLRIRITFQA LD