| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1574 |
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| Symbol | |
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| ID | 3568659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1687562 |
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| End bp | 1690087 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680042 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_284793 |
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| Protein GI | 71907206 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTCT GGAGCGCGCT CGTTCTCGCC TCCCTGTTTG CCCAGCGTGA GCAGCTGAAC
CGAACCGCAG CCGAACTGGC AAGAATCGAC GCCGTTGCAA ACCTGAAGAA AGACATGGCC
ATCCGCAAAT GGGCATCTTC GGTAGAGGGC GTCTTCATCC GCGAAAAATT CATCCCGCCG
CACAATTCAC TTGAGGAAGA AGAGCGCCTG AACGCGGAGC GTAGCAACGG AGAGCGCCTA
CGACTCGTCA CCGTGACCCC TATTCATCTT CTGCTCGCCA TACAAGGGCA AGTCAGAGGC
GATTCCGGCC TTCAAGAACG CCTCACCTCA AAGCAATTGC GCAATATCGG CAACGCACCG
GACGCATGGG AGACACAAGC GCTGGAGGCA CTTAGCCGCG GTGGCGACAT GGTCACCGAA
GCCCTGCCCA AGAAGGGGGG ACATGGCTTG ATGCGGGCCA TGATTCCGAT GCGAATGGAA
AAGGAATGCC TCGAGTGCCA CCGTGACACC CTGGTGCCCG TCGGTGGCTT GCGTGGCGGT
GCGACGGTCA GCATCGACCT CAATACCTAC CGGAGCGCCC AAGAGCCAAC CTGGCGTGTC
ATCCGCTATT GGCACACCGG TATCTGGCTA CTCGGCATCG CCACTATCCT GCTCCTCCAC
TACATCGCCC GACGACGTAC TGCGGATCTG CTACGCGTCG AGGAAGGTCG CCGGGAAAAC
GAGATGGCAT TTGCCGCCAT GGCGGAGGGC GCCGTTATCA CCGATTCCGA GGGCACGATC
CTGTGGGTCA ATGATGCGTT CTGCCAGATC TCCGGTTACG CACGCGAAGA AGTCATCGGC
GCCAACCCGC GCATCCTGAA ATCCGGCGTG CATGACCGTG ACTTCTATGC CGCACTCTGG
CGACAACTGA TGCAGACGGG ACACTGGCGC GGCGAAATCT GGAACAAGCG AAAAAATGGG
GAAATCTATC CAGAAGAAAT ATCCATGCAG GCCCTGCGTG CCCCCAATGG GAGCATCCAT
CGCTACATCT CCATTTTTTC CGACATTACC GAGCGCAAGA AAACTGAGCG TGAACTAGCC
AGCCACCACG AGCGTCTCGA GGAGCAGGTC AGAGAGCGCA CCGAGGAACT GAGCGTCGCC
CGCGACCAGG CGGAAGCCGC AAACCAAAGC AAATCAGCCT TCCTCGCCAA CATGAGCCAC
GAGTTGCGCA CCCCGCTGAA TGCCGTCATC GGATTCTCGC AGTTAATGGA GAAGGATCCC
GGTCTGTTGC CGGTCCAGCA ACGCAACCTG GAGATCATCA ACCACTCCGG TCGCCATTTG
CTCACGCTGA TCAACGATAT CCTGGAGCTC TCCAAGATCG AGTCCGGAAA ACTCAGGATG
ACCACCGAAG AAACCGATCT TCGGCTGTTG CTCGAACAGG TCGTGGAGAT GATGCATCTC
CGTGCCCAGC AGCTCGGCCT GCAACTGAAA CTGGAAACCA CCAATCTACC ACCCCTGATC
GTCATCGATC CCGGCATGTT CCGCCAGATA TTGCTCAACC TGCTATCCAA CGCCCTCAAG
TTCACGCCAA AAGGTGAAGT GTGCCTGCAC GTTGCCGCCG AGGCTGTCAG CGCACAGCAG
TCCCGGATAA GGTTCAGCGT CCGCGATACC GGCATTGGAA TTTCCGAGAA CGACCGTGAG
CGAATCTTCT CCTCTTTCGA ACAAGTCGGT CCGATGCATC AAGGTGGAAC AGGACTGGGA
CTGACCATCA GTCGCCGCTA CGTCGAGATG CTCGGAGGGG AACTGAGTGT CGATTCGGAA
CTCGGCAACG GCTCGGACTT CCATTTCACC ATTTTGGTTG GCGTTGGCGA AATGAAGCGC
TTGCCCAATG CCCCCGCCAC ACTGCAAATT TCGCCGGAGA CATGCCGGCA ACGCATTCTC
GTCGTCGATG ACAGCCCCGA GGCTCGCCTC CTCATCCGCT CCTTGCTTGA ACCACTCGGC
TTCTTGATTG GCGAATCGGC CAGCCTGGAC GAGGCACGAC AATCAATCGC TGAAAATCGC
CCCGACCTGA TTCTGCTCGA CTGGCTCTTG CCTGATGGCG AGGGCAGCCA ACTGATCCGG
GAGCTATCGG CATCGCCCAC CGCTCTTCCA CGAATCGTCA TTCTCACGGC CAACGCCCTG
GCCGAAACTC GGGTACAAGC CCTCGCTGCA GGCGCCGACG ATTTCCTGTG CAAGCCCTTC
GAACGAGCCG ACCTTCTGCG CAGCATCGGC AACTGCCTAA ACCTCCCCTT CTTTGAAGCA
ACCGGAGGGT CAGCCTCTTC CGCACCAGAA ACCACGCGTC AGCCGGAACT GGCGGATCTG
CCCGATGAGT GGCGCAACCG TCTAACCCAG GCTGCGCTAT CGCTCAACCC CGAGGAGATC
GACAATGTCC TCCAACGTAT TGCCAGCATC GCCCCCGAGA CCGCCAGAGC GTTAACCGAG
TTGTGCCGTG AGCGCCGCTA CCAATCGCTC TGGGACCTGC TGGGCATACT GGAACAAGAG
GATTGA
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| Protein sequence | MLVWSALVLA SLFAQREQLN RTAAELARID AVANLKKDMA IRKWASSVEG VFIREKFIPP
HNSLEEEERL NAERSNGERL RLVTVTPIHL LLAIQGQVRG DSGLQERLTS KQLRNIGNAP
DAWETQALEA LSRGGDMVTE ALPKKGGHGL MRAMIPMRME KECLECHRDT LVPVGGLRGG
ATVSIDLNTY RSAQEPTWRV IRYWHTGIWL LGIATILLLH YIARRRTADL LRVEEGRREN
EMAFAAMAEG AVITDSEGTI LWVNDAFCQI SGYAREEVIG ANPRILKSGV HDRDFYAALW
RQLMQTGHWR GEIWNKRKNG EIYPEEISMQ ALRAPNGSIH RYISIFSDIT ERKKTERELA
SHHERLEEQV RERTEELSVA RDQAEAANQS KSAFLANMSH ELRTPLNAVI GFSQLMEKDP
GLLPVQQRNL EIINHSGRHL LTLINDILEL SKIESGKLRM TTEETDLRLL LEQVVEMMHL
RAQQLGLQLK LETTNLPPLI VIDPGMFRQI LLNLLSNALK FTPKGEVCLH VAAEAVSAQQ
SRIRFSVRDT GIGISENDRE RIFSSFEQVG PMHQGGTGLG LTISRRYVEM LGGELSVDSE
LGNGSDFHFT ILVGVGEMKR LPNAPATLQI SPETCRQRIL VVDDSPEARL LIRSLLEPLG
FLIGESASLD EARQSIAENR PDLILLDWLL PDGEGSQLIR ELSASPTALP RIVILTANAL
AETRVQALAA GADDFLCKPF ERADLLRSIG NCLNLPFFEA TGGSASSAPE TTRQPELADL
PDEWRNRLTQ AALSLNPEEI DNVLQRIASI APETARALTE LCRERRYQSL WDLLGILEQE
D
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