Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1574 |
Symbol | |
ID | 3568659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1687562 |
End bp | 1690087 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637680042 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_284793 |
Protein GI | 71907206 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGTCT GGAGCGCGCT CGTTCTCGCC TCCCTGTTTG CCCAGCGTGA GCAGCTGAAC CGAACCGCAG CCGAACTGGC AAGAATCGAC GCCGTTGCAA ACCTGAAGAA AGACATGGCC ATCCGCAAAT GGGCATCTTC GGTAGAGGGC GTCTTCATCC GCGAAAAATT CATCCCGCCG CACAATTCAC TTGAGGAAGA AGAGCGCCTG AACGCGGAGC GTAGCAACGG AGAGCGCCTA CGACTCGTCA CCGTGACCCC TATTCATCTT CTGCTCGCCA TACAAGGGCA AGTCAGAGGC GATTCCGGCC TTCAAGAACG CCTCACCTCA AAGCAATTGC GCAATATCGG CAACGCACCG GACGCATGGG AGACACAAGC GCTGGAGGCA CTTAGCCGCG GTGGCGACAT GGTCACCGAA GCCCTGCCCA AGAAGGGGGG ACATGGCTTG ATGCGGGCCA TGATTCCGAT GCGAATGGAA AAGGAATGCC TCGAGTGCCA CCGTGACACC CTGGTGCCCG TCGGTGGCTT GCGTGGCGGT GCGACGGTCA GCATCGACCT CAATACCTAC CGGAGCGCCC AAGAGCCAAC CTGGCGTGTC ATCCGCTATT GGCACACCGG TATCTGGCTA CTCGGCATCG CCACTATCCT GCTCCTCCAC TACATCGCCC GACGACGTAC TGCGGATCTG CTACGCGTCG AGGAAGGTCG CCGGGAAAAC GAGATGGCAT TTGCCGCCAT GGCGGAGGGC GCCGTTATCA CCGATTCCGA GGGCACGATC CTGTGGGTCA ATGATGCGTT CTGCCAGATC TCCGGTTACG CACGCGAAGA AGTCATCGGC GCCAACCCGC GCATCCTGAA ATCCGGCGTG CATGACCGTG ACTTCTATGC CGCACTCTGG CGACAACTGA TGCAGACGGG ACACTGGCGC GGCGAAATCT GGAACAAGCG AAAAAATGGG GAAATCTATC CAGAAGAAAT ATCCATGCAG GCCCTGCGTG CCCCCAATGG GAGCATCCAT CGCTACATCT CCATTTTTTC CGACATTACC GAGCGCAAGA AAACTGAGCG TGAACTAGCC AGCCACCACG AGCGTCTCGA GGAGCAGGTC AGAGAGCGCA CCGAGGAACT GAGCGTCGCC CGCGACCAGG CGGAAGCCGC AAACCAAAGC AAATCAGCCT TCCTCGCCAA CATGAGCCAC GAGTTGCGCA CCCCGCTGAA TGCCGTCATC GGATTCTCGC AGTTAATGGA GAAGGATCCC GGTCTGTTGC CGGTCCAGCA ACGCAACCTG GAGATCATCA ACCACTCCGG TCGCCATTTG CTCACGCTGA TCAACGATAT CCTGGAGCTC TCCAAGATCG AGTCCGGAAA ACTCAGGATG ACCACCGAAG AAACCGATCT TCGGCTGTTG CTCGAACAGG TCGTGGAGAT GATGCATCTC CGTGCCCAGC AGCTCGGCCT GCAACTGAAA CTGGAAACCA CCAATCTACC ACCCCTGATC GTCATCGATC CCGGCATGTT CCGCCAGATA TTGCTCAACC TGCTATCCAA CGCCCTCAAG TTCACGCCAA AAGGTGAAGT GTGCCTGCAC GTTGCCGCCG AGGCTGTCAG CGCACAGCAG TCCCGGATAA GGTTCAGCGT CCGCGATACC GGCATTGGAA TTTCCGAGAA CGACCGTGAG CGAATCTTCT CCTCTTTCGA ACAAGTCGGT CCGATGCATC AAGGTGGAAC AGGACTGGGA CTGACCATCA GTCGCCGCTA CGTCGAGATG CTCGGAGGGG AACTGAGTGT CGATTCGGAA CTCGGCAACG GCTCGGACTT CCATTTCACC ATTTTGGTTG GCGTTGGCGA AATGAAGCGC TTGCCCAATG CCCCCGCCAC ACTGCAAATT TCGCCGGAGA CATGCCGGCA ACGCATTCTC GTCGTCGATG ACAGCCCCGA GGCTCGCCTC CTCATCCGCT CCTTGCTTGA ACCACTCGGC TTCTTGATTG GCGAATCGGC CAGCCTGGAC GAGGCACGAC AATCAATCGC TGAAAATCGC CCCGACCTGA TTCTGCTCGA CTGGCTCTTG CCTGATGGCG AGGGCAGCCA ACTGATCCGG GAGCTATCGG CATCGCCCAC CGCTCTTCCA CGAATCGTCA TTCTCACGGC CAACGCCCTG GCCGAAACTC GGGTACAAGC CCTCGCTGCA GGCGCCGACG ATTTCCTGTG CAAGCCCTTC GAACGAGCCG ACCTTCTGCG CAGCATCGGC AACTGCCTAA ACCTCCCCTT CTTTGAAGCA ACCGGAGGGT CAGCCTCTTC CGCACCAGAA ACCACGCGTC AGCCGGAACT GGCGGATCTG CCCGATGAGT GGCGCAACCG TCTAACCCAG GCTGCGCTAT CGCTCAACCC CGAGGAGATC GACAATGTCC TCCAACGTAT TGCCAGCATC GCCCCCGAGA CCGCCAGAGC GTTAACCGAG TTGTGCCGTG AGCGCCGCTA CCAATCGCTC TGGGACCTGC TGGGCATACT GGAACAAGAG GATTGA
|
Protein sequence | MLVWSALVLA SLFAQREQLN RTAAELARID AVANLKKDMA IRKWASSVEG VFIREKFIPP HNSLEEEERL NAERSNGERL RLVTVTPIHL LLAIQGQVRG DSGLQERLTS KQLRNIGNAP DAWETQALEA LSRGGDMVTE ALPKKGGHGL MRAMIPMRME KECLECHRDT LVPVGGLRGG ATVSIDLNTY RSAQEPTWRV IRYWHTGIWL LGIATILLLH YIARRRTADL LRVEEGRREN EMAFAAMAEG AVITDSEGTI LWVNDAFCQI SGYAREEVIG ANPRILKSGV HDRDFYAALW RQLMQTGHWR GEIWNKRKNG EIYPEEISMQ ALRAPNGSIH RYISIFSDIT ERKKTERELA SHHERLEEQV RERTEELSVA RDQAEAANQS KSAFLANMSH ELRTPLNAVI GFSQLMEKDP GLLPVQQRNL EIINHSGRHL LTLINDILEL SKIESGKLRM TTEETDLRLL LEQVVEMMHL RAQQLGLQLK LETTNLPPLI VIDPGMFRQI LLNLLSNALK FTPKGEVCLH VAAEAVSAQQ SRIRFSVRDT GIGISENDRE RIFSSFEQVG PMHQGGTGLG LTISRRYVEM LGGELSVDSE LGNGSDFHFT ILVGVGEMKR LPNAPATLQI SPETCRQRIL VVDDSPEARL LIRSLLEPLG FLIGESASLD EARQSIAENR PDLILLDWLL PDGEGSQLIR ELSASPTALP RIVILTANAL AETRVQALAA GADDFLCKPF ERADLLRSIG NCLNLPFFEA TGGSASSAPE TTRQPELADL PDEWRNRLTQ AALSLNPEEI DNVLQRIASI APETARALTE LCRERRYQSL WDLLGILEQE D
|
| |