Gene Daro_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1571 
Symbol 
ID3568656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1683331 
End bp1685613 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content58% 
IMG OID637680039 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_284790 
Protein GI71907203 
COG category[C] Energy production and conversion 
COG ID[COG4263] Nitrous oxide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.915615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT TTGTAGTTAA GACGACCGCG GTTTTGCTGG CAGCGGGTTT TGCCGCCACG 
GCATGGTCTG CCGAATCGCT GCAGGACGTG ATGAAGCGTC GCGGTCTCAG CCAGCAGGAT
CTGCTCGCTG CCTCCAAGAC CTATGTCCCG ACCGGCAAGC GTGACGAGTT CGTCGCCTTC
AGTTCTGGCG GCCAGTCCGG CCAGATCATC GTGTACGGTA TTCCGTCCAT GCGCATCCTG
AAGTACATCG GCGTCTTCAC GCCGGAACCT TGGCAAGGCT ACGGCTTTGA CGAAGAATCC
AAGGCTGTGC TGCGTCAGGG CAACATCGAC GGCAAGGAAA TCAACTGGGG CGATACGCAC
CACCCGGCCA TGTCCGAAAC CCAGGGCAAG TATGACGGTC AGTTCCTCTT CATCAACGAC
AAGGCCAATC CGCGCCTCGC CGTGATCGAC CTGCGTGACT TCGAAACCAA GCAGATCGTG
GTCAACCCGA TCTTCAAGTC CGAACACGGT GGCGCCTTCG TCACCCAGGA TACGGACTAC
GTCATCGAAG CTGCCCAGTA CGCCTCGCCG CTCGAGAACA AGAAGTTCTT CCCGCTCGAA
GAGTTCAACG AAAAGTATCG CGGTGGTGTG ACCTACTGGA AGTTCGACCG CAAGGAAGGC
CGCATCGATC CGAAGAAGTC GTTCTCCCTC GAACTGCCGC CGTACAGCCA GGACTTGTCT
GACGCGGGTA AAGGCCCGTC CGACGGTTGG TCCTTCACCA ATTCCTTCTG TTCCGAGCGT
TACGTTGGCG GCATCGAAAA AGGCCGTCCG CCGTATGAAG CCGGTTGCTC TGCCAAGGAC
ACCGACTATC TGCACGTGAT CAACTGGAAG AAGGCTGCTG AACTGGTTGC CCAGGGCAAG
GCCAAGAAGA TCAACGGCCA CGACGTGATC ATGATGGAAA CCGCGATCAA GGAAGGCATC
CTCTTCCTGG TTCCGGAACC GAAGTCGCCG CACGGCGTCG ACGTCACGCC GGACGGCAAG
TTCCTGACCG TTGCCGGCAA ACTCGACACC CACGTCTCCG TCTATTCCTT CGAGAAGATT
CAGGCCGCCA TCAAGGCCGG CAAGTTCGAA TCCAAGGATC CGTACGGTAT TCCGGTCATC
GGCATGAAGG ATGCACTGCA CACCCAGGTT CAGCTCGGCC TTGGCCCATT GCATACCCAG
TATGACTCCA AGCCGTGTAT CGCCTACACC TCGCTTTACG TCGACTCCCA AGTCGTCAAG
TGGAATCACT GTGAAGGCAA GGTCCTCGAC AAGATCTCGG TGCACTACAA CATCGGTCAC
CTGATGACCA TGGAAGGCGA CTCGGCTGAT CCGAAGGGCC GTTACCTGGT GGCGCTGAAC
AAGCTCTCCA TCGACCGCTT CACGCCGGTT GGTCCGCTGC ATCCGCAGAA CCACCAGTTG
ATCGACATCA GCAACGACAA GATGCAACTC CTGTACGACA TGCCCGTACC GCTGGGTGAG
CCGCACTACG TGGTGGCCAT CGAAGCCTCG AAGCTGAAAC CAGGCGTTCG CTACAAGGTC
GGCACCAACA GCCGTACCGA CAAGCCGAGC CCGTTCGGTG TTCGCGCCGG TGAAGAGCAC
ACCGACAAGA AGGGTAACAA GATCGAAGTC TTTGGCACCC TGATCCGTTC GCACATCACG
CCGGAAACCA TCGAAGCCGA AGTCGGCGAC GAAGTGACGG TCCACCTGAC TAACCTGGAA
CGCGCTCAGG ACGAAACCCA CGGCTTTACC GTGTCGACGT TCAACACCCA CGCTTCAGTT
GAGCCGGGCA AGACGGTGAC CGTCAAGTTC AAGGCGGACA AGGAAGGCGT CTATCCGTAC
TACTGCACGG AATTCTGCTC CGCACTGCAC CTTGAAATGC AGGGTTACCT GCTGGTCAAG
CCGAAGGGCT GGAAGCCGGG CAAGACGGCC GAAGCCAAGG CCAGCTACAC GGAAGCCGAC
TATAAGGCGA CGGTGAAGAA GGTGGCTGAT ACCCAGGTCG TTATTGATTC CGTGGTGGGT
TTCATCACCA GCGTGAATTA CAAGGACTTC CCGGATGTCG TGGCCATGGT CGAAGATGCA
ACCGACCAGT TGAACAAGAT GAAGGATGCC AAGGCCAAGC ACGAAGCCGC AGCCGCCAAG
AAGGATTGGG ACCAGGCCAA CCTGTGGGCT GAGCAAGTCT GGCAATACCA GGTCAAGGCA
GCTGACATCG GCCTGCGTGC CAAGACCTAC CTCGAACAGA ACGGCGCCAA GAAGGTCAAG
TAA
 
Protein sequence
MKKFVVKTTA VLLAAGFAAT AWSAESLQDV MKRRGLSQQD LLAASKTYVP TGKRDEFVAF 
SSGGQSGQII VYGIPSMRIL KYIGVFTPEP WQGYGFDEES KAVLRQGNID GKEINWGDTH
HPAMSETQGK YDGQFLFIND KANPRLAVID LRDFETKQIV VNPIFKSEHG GAFVTQDTDY
VIEAAQYASP LENKKFFPLE EFNEKYRGGV TYWKFDRKEG RIDPKKSFSL ELPPYSQDLS
DAGKGPSDGW SFTNSFCSER YVGGIEKGRP PYEAGCSAKD TDYLHVINWK KAAELVAQGK
AKKINGHDVI MMETAIKEGI LFLVPEPKSP HGVDVTPDGK FLTVAGKLDT HVSVYSFEKI
QAAIKAGKFE SKDPYGIPVI GMKDALHTQV QLGLGPLHTQ YDSKPCIAYT SLYVDSQVVK
WNHCEGKVLD KISVHYNIGH LMTMEGDSAD PKGRYLVALN KLSIDRFTPV GPLHPQNHQL
IDISNDKMQL LYDMPVPLGE PHYVVAIEAS KLKPGVRYKV GTNSRTDKPS PFGVRAGEEH
TDKKGNKIEV FGTLIRSHIT PETIEAEVGD EVTVHLTNLE RAQDETHGFT VSTFNTHASV
EPGKTVTVKF KADKEGVYPY YCTEFCSALH LEMQGYLLVK PKGWKPGKTA EAKASYTEAD
YKATVKKVAD TQVVIDSVVG FITSVNYKDF PDVVAMVEDA TDQLNKMKDA KAKHEAAAAK
KDWDQANLWA EQVWQYQVKA ADIGLRAKTY LEQNGAKKVK