Gene Daro_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1569 
Symbol 
ID3568654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1682098 
End bp1682823 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content56% 
IMG OID637680037 
Productcytochrome c, class I 
Protein accessionYP_284788 
Protein GI71907201 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.0100945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.526038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT CACTTCTGCT GATCGGTCTG CTCAGCGCAG GCGTCGCCTT CGCCGGCCCA 
CCGGCACCAC ACAAGGAAGG CATCGAGAGC AAGGACTACA AGTGGAACGC CGAAGGTGGC
GAAAAGATGG AAGCCCTGCA CAAGAAGGGT AACGTCAAGA ATGGCGAGGA AGTCTATGAG
ATTTGCGGCG CCTGCCACCT GCCCTCCGGC GCAGGCCGAG CTGATGGCAC CTTCCCGCAA
CTGGCTGGTC AACATTCTAC GGTGCTGATC AAGCAGATGG CCGACATCCG CTCCGGCGAG
CGCGACAATC CGACCATGTA TCCGTTTGCC TCCACCCTGA CCGATCCACA GGAACTGGCT
GATGCAGCCG CTTACATCAA CAGCCTGTGC ATTCCACTCG AGCATGGCAA GTATGAAGGT
GCTGATGCAG CCATGCAGAT CGCCAAGGGC AAGGAATTGT ATGAAAAGGA ATGCCTGGAA
TGCCACGGCA AGACCGGCGA AGGTAACAAG GAAAAGTTCT ACCCGGTAAT CGCCGGCCAG
CACTACAAGT ACCTGTTGCG TCAGATGACT GAAATCCGTG ATGGCAAGCG CCGCAACGCC
AATCCGGACA TGGTCAAGAT CATCAAGAAG TACGATAACC AGCAGTTGAT CGCCATCTCC
GCCTACCAGT CGAGCATGGT GATGCCGGGT GCGATGTGCA AGCCGAAGGC CGGAAAAAAG
AAGTAA
 
Protein sequence
MKASLLLIGL LSAGVAFAGP PAPHKEGIES KDYKWNAEGG EKMEALHKKG NVKNGEEVYE 
ICGACHLPSG AGRADGTFPQ LAGQHSTVLI KQMADIRSGE RDNPTMYPFA STLTDPQELA
DAAAYINSLC IPLEHGKYEG ADAAMQIAKG KELYEKECLE CHGKTGEGNK EKFYPVIAGQ
HYKYLLRQMT EIRDGKRRNA NPDMVKIIKK YDNQQLIAIS AYQSSMVMPG AMCKPKAGKK
K