Gene Daro_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1568 
Symbol 
ID3568653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1681034 
End bp1682026 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content53% 
IMG OID637680036 
Producthypothetical protein 
Protein accessionYP_284787 
Protein GI71907200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.00971838 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.55843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGA ACAGCAAAAT GGAAAAACAA AATAAAATTA TCGGTGGCTT GACCCTGATT 
TCCCTGATCT GCCTGGTCGC CGCTTATTTC GCCCCGATCT GGTGGGTTTC GCTGACCGCC
CCCAATTATC CCCCCGATGC CTTCCCTGAT GGTATCCGCA TCCATTTCCA TTTCGATGGC
GTCTATAACG GCTGCAAAGC GGCCGGCAAA GGTAGCCGTA TGGCTAGCGA GATCATCCAA
AAGGATCTGG AGGATACCGA CGAGCGCTAC AACCCGATTA CCGACGCAGC AAAAAATGTA
GACAAAGGCG CTGAAGGGCT CGATTGCGTT CATGAGATGA ACACCATCAA CCACTATGTC
GGCATGTTCC CGATCGCTAC TGGTGCCCCC GTCGAAAAAC CGCTGGCCAA ATTCTTCTTC
GGCTTCTTCG CCGTCATGAT GCTGGCCTTC ACCATGGCCA AGAAAAAACC GCGTTTATTG
ATTTTGACCG CTGGTTTCGC TGCTGTCGCC GCCTGGATGA TTGTTGATCA ATTCGTACTG
GGCCATCTGG AAAGCCACGT TCAGGCGTAC ATGCAGGAAT CCGGCACCTT CTTCAAGGAT
ATGGAGCGAA TCAGCGCCTG GGGCGACAAC GTCCGCAACG TCTCGAAAAT TGTCATCTTC
GGCCTGATTG CGGTCATGGG AATCGTTATT GCAGGGACGG CCAAAATTCG CTCCTTCCAA
CTACTGCTCG CACTGGTACC GGCCCTGTTG CCTGTCTTCT TTGTAATCAC CTATGCTGGT
TGGTTGTGGT TCTTTGGCCA CAACATGCAC CCATGGGGCG CCTTTACCGT CAAGCCCTTC
ATGCCTACCG TATTCGGCGA AGGCAAAGTG GCCCAGTTCT CAACCTTCTC TTATCCCTAC
TGGGGCTATG GCCTGCTGGT GGCAATATTT GCTTGTATGA TGCTAGCCCT GCTGATGCGC
CGCAAACAAC TGCGCGAAGG CACTGCTGAG TAA
 
Protein sequence
MTENSKMEKQ NKIIGGLTLI SLICLVAAYF APIWWVSLTA PNYPPDAFPD GIRIHFHFDG 
VYNGCKAAGK GSRMASEIIQ KDLEDTDERY NPITDAAKNV DKGAEGLDCV HEMNTINHYV
GMFPIATGAP VEKPLAKFFF GFFAVMMLAF TMAKKKPRLL ILTAGFAAVA AWMIVDQFVL
GHLESHVQAY MQESGTFFKD MERISAWGDN VRNVSKIVIF GLIAVMGIVI AGTAKIRSFQ
LLLALVPALL PVFFVITYAG WLWFFGHNMH PWGAFTVKPF MPTVFGEGKV AQFSTFSYPY
WGYGLLVAIF ACMMLALLMR RKQLREGTAE