Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1568 |
Symbol | |
ID | 3568653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1681034 |
End bp | 1682026 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637680036 |
Product | hypothetical protein |
Protein accession | YP_284787 |
Protein GI | 71907200 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.00971838 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.55843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAGA ACAGCAAAAT GGAAAAACAA AATAAAATTA TCGGTGGCTT GACCCTGATT TCCCTGATCT GCCTGGTCGC CGCTTATTTC GCCCCGATCT GGTGGGTTTC GCTGACCGCC CCCAATTATC CCCCCGATGC CTTCCCTGAT GGTATCCGCA TCCATTTCCA TTTCGATGGC GTCTATAACG GCTGCAAAGC GGCCGGCAAA GGTAGCCGTA TGGCTAGCGA GATCATCCAA AAGGATCTGG AGGATACCGA CGAGCGCTAC AACCCGATTA CCGACGCAGC AAAAAATGTA GACAAAGGCG CTGAAGGGCT CGATTGCGTT CATGAGATGA ACACCATCAA CCACTATGTC GGCATGTTCC CGATCGCTAC TGGTGCCCCC GTCGAAAAAC CGCTGGCCAA ATTCTTCTTC GGCTTCTTCG CCGTCATGAT GCTGGCCTTC ACCATGGCCA AGAAAAAACC GCGTTTATTG ATTTTGACCG CTGGTTTCGC TGCTGTCGCC GCCTGGATGA TTGTTGATCA ATTCGTACTG GGCCATCTGG AAAGCCACGT TCAGGCGTAC ATGCAGGAAT CCGGCACCTT CTTCAAGGAT ATGGAGCGAA TCAGCGCCTG GGGCGACAAC GTCCGCAACG TCTCGAAAAT TGTCATCTTC GGCCTGATTG CGGTCATGGG AATCGTTATT GCAGGGACGG CCAAAATTCG CTCCTTCCAA CTACTGCTCG CACTGGTACC GGCCCTGTTG CCTGTCTTCT TTGTAATCAC CTATGCTGGT TGGTTGTGGT TCTTTGGCCA CAACATGCAC CCATGGGGCG CCTTTACCGT CAAGCCCTTC ATGCCTACCG TATTCGGCGA AGGCAAAGTG GCCCAGTTCT CAACCTTCTC TTATCCCTAC TGGGGCTATG GCCTGCTGGT GGCAATATTT GCTTGTATGA TGCTAGCCCT GCTGATGCGC CGCAAACAAC TGCGCGAAGG CACTGCTGAG TAA
|
Protein sequence | MTENSKMEKQ NKIIGGLTLI SLICLVAAYF APIWWVSLTA PNYPPDAFPD GIRIHFHFDG VYNGCKAAGK GSRMASEIIQ KDLEDTDERY NPITDAAKNV DKGAEGLDCV HEMNTINHYV GMFPIATGAP VEKPLAKFFF GFFAVMMLAF TMAKKKPRLL ILTAGFAAVA AWMIVDQFVL GHLESHVQAY MQESGTFFKD MERISAWGDN VRNVSKIVIF GLIAVMGIVI AGTAKIRSFQ LLLALVPALL PVFFVITYAG WLWFFGHNMH PWGAFTVKPF MPTVFGEGKV AQFSTFSYPY WGYGLLVAIF ACMMLALLMR RKQLREGTAE
|
| |