Gene Daro_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1567 
Symbol 
ID3568652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1679670 
End bp1681028 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content56% 
IMG OID637680035 
Productperiplasmic copper-binding 
Protein accessionYP_284786 
Protein GI71907199 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0198454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.645907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCCC TGCACAATCT GGCCAGGCTC GGCCTGGCCA CCGCACTCCT ACTGGTTCTG 
AGCACTGGCA ACACTGAACA GCAATCTGAA CTGCCTGCCG GCATGGGCGC CCGTGCCGAT
GTCGATCGCC CCAAGCCGAC GTTCATGCTG CACGAACGTG ATAAACGTGT ACATGGCTTA
AAGCCATTTC AAGATCTGGT TGACCGCGCC GAACCAGGCT CGGTACTCAA GCCCCCGCCG
GGCAACTATG CCGGCCCGGT CACCATCAAC AAGCCGCTGA CCATCGACGG TGGCGGCAAG
GTGACGATCG ATGCCGGTGA CCGTGGCACG GTGATGATGC TCAACGCCAG CAACACGGTG
GTGCGAGGCC TGCACCTGAC GGGTTCCGGC GACTCGCATG ACACCGATGA CTCCTGTCTT
GATGTTCGCG GTGACCACAA CACCATCGAG AATATCGAGA TGGACAACTG TTTGTTCGGC
CTCGACCTCA AACAGTCAAA CAACAACCTG ATTCGCGGCA ACTCTATCCG CTCCAAGGAC
CGCGAACTTG GCGTCCGCGG CGATGGCCTG CGTCTTTGGT ACAGCAATGA CAACACCATC
GAGAAGAACC AGATCATCGA CTCACGCGAC ATGGTGGCCT GGTACTCGAA CAAGAATGTT
TTCCGCGACA ACCTGGGAAA ACGTAGCCGT TACTCCATCC ATTTCATGTT CGCCAACGAC
AACGTCGTCG AGCGCAACGA GTTTTATGAC AACGCAGTCG GTGTTTACTT CATGTACACC
GAAGGCGGTG TTGTCCGCAA TAATGTCATT TCCCACGCCA CCGGCGCCAC CGGCATGGGT
ATCGGCTTCA AGGAAGCCTC CGGCACGATC ATCGAAAACA ACGAGATCAT CTATTGCGGC
GTCGGCATCG GCTCCGACCT GTCCCCCTTC CAACCCGACA GCACCATCGA AATCCGTGGC
AATCGCTTCG CCTACAACGG TACCGGCATC CTGTTCAACA GCGAAACTGG CGGCAACAAC
ATGGTCGACA ATATCTTTGA AGGCAACCTG ACCCAGGTCG CCTACGGAGG TCATGGCGAC
AACAACAATA GCCCCAAGAA CGTCTGGATC GGCAACTACT GGGACGATTA TCAAGGCTTC
GATCGCAACG GAGACGGCTT CGGCGACAAA ACCCATGAGC TGTATGCCTA TGCTGATCAA
ATCTGGATGG AACTGCCGGT TGCTCGCTTT TTCCGCAGTT CGCCAGTCAT GGAACTCCTC
GATTTTCTTG AACGCCTGGC CCCCTTCTCC ACACCGGACC TGATCCTGCG CGATGAAAAA
CCGCGCTTTA TCAAACCTGA AAGAACGGCA CGATCATGA
 
Protein sequence
MSSLHNLARL GLATALLLVL STGNTEQQSE LPAGMGARAD VDRPKPTFML HERDKRVHGL 
KPFQDLVDRA EPGSVLKPPP GNYAGPVTIN KPLTIDGGGK VTIDAGDRGT VMMLNASNTV
VRGLHLTGSG DSHDTDDSCL DVRGDHNTIE NIEMDNCLFG LDLKQSNNNL IRGNSIRSKD
RELGVRGDGL RLWYSNDNTI EKNQIIDSRD MVAWYSNKNV FRDNLGKRSR YSIHFMFAND
NVVERNEFYD NAVGVYFMYT EGGVVRNNVI SHATGATGMG IGFKEASGTI IENNEIIYCG
VGIGSDLSPF QPDSTIEIRG NRFAYNGTGI LFNSETGGNN MVDNIFEGNL TQVAYGGHGD
NNNSPKNVWI GNYWDDYQGF DRNGDGFGDK THELYAYADQ IWMELPVARF FRSSPVMELL
DFLERLAPFS TPDLILRDEK PRFIKPERTA RS