| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1553 |
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| Symbol | |
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| ID | 3566165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1663847 |
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| End bp | 1665508 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680021 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_284772 |
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| Protein GI | 71907185 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.0143852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00793845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAA TCTGGCTACA AAGCTATCCG AATGGCGTGC CGGCGGAGAT CGACATCGAC
CATATCCCGT CACTGGTCGC GCTGTTTGAA AAAGCCTGTA CGACCTTTGC CGACAAGGTT
GCCTATATCA GCATGGGGCG GGAAATTACC TATCGCCAGC TCGATGTCGA AGCCACCGAA
TTCGCAGGCT GGCTGCAAGC GAAGGGCATG CAGAAGGGTG ACCGGGTCGC GCTGATGATG
CCCAATATCC TGCAATACCC GGTGGCCTTG TTCGGTACCC TGCGGGCAGG TTGCGTCGTG
GTTAATTGCA ACCCGCTCTA CACGCCGCGT GAGTTGGAGC ACCAGTTGAA GGACTCCGGG
GCGACGGCCA TCGTCATCGT TGAAAACTTT GCGCATACGC TGGAGCAGGT CATCTCTCAC
ACGGCAATCC GCCATGTCGT GGTCACCTCG ATGGGTGAGC GCTTGGGCAG CTTGAAGGGC
ATGATCGTCA ATTTTGTCGT GCGCCGGGTC AAGAAAATGG TGCCGGCTTG GCACTTGCCG
GGGGGTATCA GTTTCAAAAC GGCACTGGCA CAGGGGCGGG CCAACGGTTT CAAGAAAGTG
GCGCTGGAAC AGGGGGATCT GGCCTTCCTG CAATACACCG GCGGTACAAC CGGGGTTTCC
AAGGGAGCGA TGCTGACCCA CGCCAATATC GCCTCTAACG TGACCCAGGC CTACAACTGG
ATCAAGCCGG TGGTGCGCGA AGGCGAGGAA TTCATCATCA CCGCCTTGCC GCTGTATCAC
ATCTTTGCGC TGACCGCGAA CTGCCTGACC TTCCTGATGA TTGGTGCGCG CAACCTGCTG
ATCGCCAATC CGCGCGACAT CCCCGGCTTC GTGAAGGAGT GGGGAAAGTA TCCGGTGACG
GTGGTGACTG GCGTCAACAC GCTGTTCAAC GCGCTGCTCA ACAACCCCGA TTTCGACAAG
CTCGATTTCT CGACCATGCG CGTCACGCTT GGCGGCGGCA TGGCGGTGCA GGGCCCGGTT
GCCGACAAGT GGCGGCAAAT CACCGGGACG CCTTTGCTGC AAGCCTACGG CCTGACCGAA
ACTTCTCCGG CAGCGACCAT CAACCCGCTC GATATGGAGG AGTTCAACGG GGCAATCGGT
CTGCCAATTT CCTCGACCGA GGTGTCGATC CGCGACGATT ACGGCAACGA AGTGCCACTC
GGCCAGGTTG GCGAAATCTG TATCCGTGGC CCGCAGGTCA TGAAGGGCTA CTGGCAGCGC
GACGATGAAA CGGCGCTGGT CTTCTACCCT GACCGCTTTC TGCGTACAGG AGACATGGGT
TATGTCGATA AAAAAGGCTT CGTTTTCTTG GTCGACCGCA AGAAGGACAT GATTCTGGTT
TCTGGCTTCA ATGTGTATCC AAACGAGGTC GAGGAAGCTG TTGCCATGCA CCCGGGGGTA
ATGGATGTCG CCGCCATCGG GGTGGCCGAC GAGCATTCGG GCGAAGCGGT GAAGATTTTC
GTCGTCCGCA AGGACCCGAA AGTCACCGAG CGCATGCTGA TCGATCACTG CCGTGGCCTG
CTCACCGGCT ACAAGATTCC GAAACACGTC GAATTCCGCG ACGACTTGCC CCGTACCAAC
GTCGGCAAGA TTCTGCGTCG TGCTTTGAAA GAGGGGGCGT AA
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| Protein sequence | MEKIWLQSYP NGVPAEIDID HIPSLVALFE KACTTFADKV AYISMGREIT YRQLDVEATE
FAGWLQAKGM QKGDRVALMM PNILQYPVAL FGTLRAGCVV VNCNPLYTPR ELEHQLKDSG
ATAIVIVENF AHTLEQVISH TAIRHVVVTS MGERLGSLKG MIVNFVVRRV KKMVPAWHLP
GGISFKTALA QGRANGFKKV ALEQGDLAFL QYTGGTTGVS KGAMLTHANI ASNVTQAYNW
IKPVVREGEE FIITALPLYH IFALTANCLT FLMIGARNLL IANPRDIPGF VKEWGKYPVT
VVTGVNTLFN ALLNNPDFDK LDFSTMRVTL GGGMAVQGPV ADKWRQITGT PLLQAYGLTE
TSPAATINPL DMEEFNGAIG LPISSTEVSI RDDYGNEVPL GQVGEICIRG PQVMKGYWQR
DDETALVFYP DRFLRTGDMG YVDKKGFVFL VDRKKDMILV SGFNVYPNEV EEAVAMHPGV
MDVAAIGVAD EHSGEAVKIF VVRKDPKVTE RMLIDHCRGL LTGYKIPKHV EFRDDLPRTN
VGKILRRALK EGA
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