Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1549 |
Symbol | |
ID | 3566161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1659110 |
End bp | 1661509 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637680017 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_284768 |
Protein GI | 71907181 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000000385995 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00376612 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGAACAAGC TGATCGTGAA GAAAGCCGCC GTGCTGGGCG CCGGCGTGAT GGGAGCGCAG ATCGCGGCGC ACCTCGCCAA TGCCAATGTG CCGGTCGTGC TGTTTGACCT GCCGGCAAAA GAAGGAGACA AGAACGGCAT CGTGAAGAAG GCCATCGACG GCCTCAAGAA GCTGGACCCG GCCCCGCTGG CCAGTAAGGG CAAGCTGAAA TTCATCGACG CCGCCAACTA CGATGAACAT CTGCCGCTGC TCGCCGAATG CGATCTGATC ATCGAAGCCA TTGCCGAACG CATGGACTGG AAGAATGATC TTTACGCCAA GATTGCGCCG CACATCGTAC CGAACGCCAT CGTCGCTTCC AACACCTCGG GCCTGTCGAT GAACCTGCTG GCTGAAGGCT TGCCGGCCAA TATTCGCCCG CGCTTCTGTG GAATCCACTT TTTCAATCCG CCGCGCTACA TGCATCTGGT CGAGATCATC TCGACCAAGA CGACCGACGG TAGCACGCTC GATGCGCTGG AAACATGGCT GACCTCGCGC TTGGGCAAGG GCGTTATCCG GGCCTTGGAT ACGCCGAATT TTGTCGCCAA CCGGATCGGC GTCTTTTCCA TTCTCGCCGT CATGCATCAC ACCCAGGCCT TCGGTCTTGG TTTCGATGAA GTCGATGCGC TGACCGGCCC GAAGATCGGT CGCCCGAAGA GCGCTACCTA TCGCACCGCC GACGTGGTGG GCCTCGATAC GCTGGCCCAC GTCGTCAAGA CCATGCAGGA CACGCTGCCC GGCGATCCGT GGCATCAATA TTTCACCAAT CCGGCCTGGT TGCAGGCCTT GATCGCCCAA GGCGCGCTTG GCCAGAAGAC CCGCTGCGGC ATCTTCCGCA AGCAGGGCAA GGAAATCCAG GTGCTCGACC TGGCCAAGCA GGATTACCGC ACTTCCGCCG GTGAGGTGGC CGACGAGGTC GCGGCCATCC TGAAGATAAG GAATCCCGCC GAGAAGTTCG CCGCCTTGCG CACCTCGGCA CATCCGCAGG CCCAGTTCCT GTGGTCCATT TTCCGCGATG TCTTCCATTA CTGCGCCGTG CAACTGGAAA ACGTCGCCGA CAACGCGCGC GACGTCGATT TTGCCATGCG CTGGGGCTTC GGCTGGGCGC AGGGTCCGTT CGAAACCTGG CAGGCGGCGG GTTGGGGCGA TATTGCCCAA AGCATTTCGG CCGATATAGC TGCCGGCAAG GCCATGGGCG ATGTGCCGCT GCCGGCCTGG GTGGTGGAAG CCGGCCGTAC GGGCGTGCAT ACGCCGGATG GTTCGTGGTC GGCTCGTGAC AAGGCTTATG CGCCACGTTC ATCGCTGCCG ATCTACCAGC GCCAGCTTTT CCCTGAACGT GTTTTGGGCG AGAGCGGTGC GACCCCGGAA AAGTCCGGCG AAACCCTGTA CGAAAACGAC GGTGTTCGCC TGTGGAAACT GCCAGCGCTC GATGCTGGGA TCGGCATCCT GTCCATCAAG TCCAAGATGC ACACCATCGG CAATGAGGTG CTCGATGGCG TGATCGCTGC CGTGCGTCAG GCCGAAACGA CGCTCGATGG CGTGGTCGTC TGGCACGAAG CGCCTTTTGC TGTCGGGGCC AACCTGCAGC AAGTGGGTGA AGCCTGCGCT GCTGGTCAGT TCGATCTCCT CGAAGCCACT GTCGAGAAGT TCCAGCGCGC TTCGCAAACC CTGAAATATG CGCAGGTGCC GGTCGTTGCT GGAGTGCAGG GTATGGCGCT GGGCGGTGGT TGCGAGTTTG TCATGCATGC CAGCAAGCGC GTCATGGCGC TGGAAAGCTA TGTCGGCCTC GTTGAGGCTG GCGTCGGCTT GATTCCGGCC GGCGGCGGCT GCAAGGAATT CGCCGTGCGG GCCGCCGAGT GGGCCGCCCA GTCGGCCACC CCGGGCGAAG TGTTCAACTT CCTGCAGCCG GTGTTCCAGA CCATCGCCAT GGCCAAGGTG GCGAAAAGCG CTGTCGAAGT CATCGACATG GGTTTCGGCA AGCCTGCGGA CACCATCCTG TTCAACGCCA ATGAACTGCT CTTCGTCGCC ATCAAGGAAG CTCGCGCCAT GGCTGAAGCC GGCTACGCCC CGCCGCCGAT GGCCCGTGGT ATTCCGGTGG CCGGCAAGAA CGGTATCGCG ACGCTGGAGA TGATGCTGGT CAACATGAAA GAGGGCGGCA TGATTTCCGC ACATGACTAT CGTGTGGCCA AGGCTGCAGC GACCGCTTTG TGCGGTGGCG AGATCGAAAC CGGCAGCCTG GTCGATGAGG AATGGTTGCT GACCATTGAG CGCCAGTTGT TCGTCGAATT GCTGAAGACC CCCGAAACCC AGGCCCGGAT CAAGCACATG CTTGAAACTG GCAAGCCTCT TCGTAACTAA
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Protein sequence | MNKLIVKKAA VLGAGVMGAQ IAAHLANANV PVVLFDLPAK EGDKNGIVKK AIDGLKKLDP APLASKGKLK FIDAANYDEH LPLLAECDLI IEAIAERMDW KNDLYAKIAP HIVPNAIVAS NTSGLSMNLL AEGLPANIRP RFCGIHFFNP PRYMHLVEII STKTTDGSTL DALETWLTSR LGKGVIRALD TPNFVANRIG VFSILAVMHH TQAFGLGFDE VDALTGPKIG RPKSATYRTA DVVGLDTLAH VVKTMQDTLP GDPWHQYFTN PAWLQALIAQ GALGQKTRCG IFRKQGKEIQ VLDLAKQDYR TSAGEVADEV AAILKIRNPA EKFAALRTSA HPQAQFLWSI FRDVFHYCAV QLENVADNAR DVDFAMRWGF GWAQGPFETW QAAGWGDIAQ SISADIAAGK AMGDVPLPAW VVEAGRTGVH TPDGSWSARD KAYAPRSSLP IYQRQLFPER VLGESGATPE KSGETLYEND GVRLWKLPAL DAGIGILSIK SKMHTIGNEV LDGVIAAVRQ AETTLDGVVV WHEAPFAVGA NLQQVGEACA AGQFDLLEAT VEKFQRASQT LKYAQVPVVA GVQGMALGGG CEFVMHASKR VMALESYVGL VEAGVGLIPA GGGCKEFAVR AAEWAAQSAT PGEVFNFLQP VFQTIAMAKV AKSAVEVIDM GFGKPADTIL FNANELLFVA IKEARAMAEA GYAPPPMARG IPVAGKNGIA TLEMMLVNMK EGGMISAHDY RVAKAAATAL CGGEIETGSL VDEEWLLTIE RQLFVELLKT PETQARIKHM LETGKPLRN
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