| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1547 |
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| Symbol | |
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| ID | 3566159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1655575 |
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| End bp | 1657488 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680015 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_284766 |
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| Protein GI | 71907179 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.000330184 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0227178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATGA ATCTGCAACA CTGGAAGCTG GTCGCTGATG CGGCGGGTAT CGCCACCGCT
ACGCTCGACA AGGCGGGCGA ATCGGCCAAC TCCTTGTCGG CCGAAGTGCT CAGCGAGTTT
TCGGCCATTC TTGACCGGCT CGACGCCTAT CCGCCCAAAG GCCTGATCAT CCGCTCCGGC
AAGGAGGCTG GTTTTATCGC CGGGGCCGAT ATCGCTGAGT TTTCGCAACT CGATACCCCG
GAAAAGAGCA GGGCGCTGGT CGAACGGGGC TGGAATCTGT TCAACCGGCT GGCGGCGGTC
AAATATCCGA CACTGGCTTT GGTCCGTGGG CACTGCCTGG GGGGTGGTCT GGAACTGGCA
CTGGCCTGTC GCTATCTGCT GGCGGTCGAC GAGTCGGGTA CCAAGATGGG GCTACCGGAA
GTCATGCTCG GCATCTTTCC CGGCTGGGGT GGCATGTTGC GCCTGCCGCA GCGGGTTGGC
CCTGCTGCCG CATTGGATCT GATGCTGACT GGCAAGACAC TGGATGCCAA GCGGGCAAAG
AAAATGGGCT TGGCTGACGA TTGCGTGCCG CCGCGCGTCA TGGAAATGGC GGCTCGCCAG
CTGGTGTTGT CCGGCCAGCC GCGCCGCCAA CTGCCTTTTG TTCAGCGCCT GCTCAATGGC
CCTCTGAAGT CGGTGGTGGC CAACGGCGCG CGCAAGCAGG TGGCGAAGAA GGCGCGGCCG
GAACACTACC CGGCCCCCTA CGCGATCATC GACTTGTGGG CGAAGCACGA CGGAAATGCC
CTGGCCGCGC CGGAGGTAGT CGATCGCATC ATTTCTTCAC CGACTGCACG CAATCTACTT
CGGGTGTTCC ACCTGCAGGA GCGCCTGAAA GGCTTCGGCA AGGAGTCCGC TTTCAAAGCC
AAGCGCGTTC ATGTCATTGG TGCCGGCGTC ATGGGCGGCG ACATCGCAGC CTGGTGTGCG
TTGCGCGGCA TGACCGTGAC CCTGCAGGAT CAGACGCTGG AGCGCATTTC GCCGGCGCTG
AAGCGGGCTC ATGCCTTGTT CACCAAACGT CTGCGCGAGC CGCTGAAAAT TCGTGATGCC
TTCGATCGCC TGATTCCCGA CCCCAAAGGG GATGGCGTGG CACATGCTGA TGTGGTGATC
GAAGCCATTT TCGAGAACGT CGAAGCCAAG CACGCCCTGT TTAAGTCGGT TGAACCCAGG
TTGAAGCCGG GGGCGGTGCT GGCCACCAAT ACTTCCAGCT TGCGCCTGGA AGATTTGCGA
ACGGTGTTGC AGCGCCCCGA ACGACTGGTC GGTATCCACT ACTTCAATCC GGTGGCGATG
ATGCCGCTGG TCGAGGTGGT TGCCGCCGAG GGAGCTGATC CCTCCGCCGT TCAGGCTGCT
TGCGCCTTTG TCCGGCAGAT CGACAAGTTG CCGTTACCGG TGAAGAGTGC TCCGGGTTTC
CTGGTCAACG CGGTATTGGC GCCTTACATG CTGGAAGCGA TGCGCGCGGT CGATTCGGGA
ATTTCGCCGG AAACCGTCGA TGAAGCCATG CTTGCCTTCG GAATGCCGAT GGGGCCGATA
GAGCTGATCG ATACGGTGGG CCTCGATATT GCGATGGCCG CCGGTCAGCA ATTGGCCGGT
GGGGCAGAAG CACCACGTTG CCTAATCGCT CGCGTTGATA AAAATCAGTT GGGCAAAAAA
TCCGGGCAGG GCTTCTATCA CTGGACCGAT GGCAAGGCTA AAAAAGGCGC AGCCGCGGGT
GTTCCCGCCG GGCTGGCAGA TCGCTTGGTC AAACCCTTGA TCGACCGTGT TGAGCAGCTG
GTCGCTGCAG GTGTCGTCGC CGATACCGAA CTGGCTGATG CCGGGGTAAT TTTCGGGACA
GGCTTCGCAC CGTTTACGGG CGGGCCACTT AACTACCGCC GGGTAAATCG ATAA
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| Protein sequence | MIMNLQHWKL VADAAGIATA TLDKAGESAN SLSAEVLSEF SAILDRLDAY PPKGLIIRSG
KEAGFIAGAD IAEFSQLDTP EKSRALVERG WNLFNRLAAV KYPTLALVRG HCLGGGLELA
LACRYLLAVD ESGTKMGLPE VMLGIFPGWG GMLRLPQRVG PAAALDLMLT GKTLDAKRAK
KMGLADDCVP PRVMEMAARQ LVLSGQPRRQ LPFVQRLLNG PLKSVVANGA RKQVAKKARP
EHYPAPYAII DLWAKHDGNA LAAPEVVDRI ISSPTARNLL RVFHLQERLK GFGKESAFKA
KRVHVIGAGV MGGDIAAWCA LRGMTVTLQD QTLERISPAL KRAHALFTKR LREPLKIRDA
FDRLIPDPKG DGVAHADVVI EAIFENVEAK HALFKSVEPR LKPGAVLATN TSSLRLEDLR
TVLQRPERLV GIHYFNPVAM MPLVEVVAAE GADPSAVQAA CAFVRQIDKL PLPVKSAPGF
LVNAVLAPYM LEAMRAVDSG ISPETVDEAM LAFGMPMGPI ELIDTVGLDI AMAAGQQLAG
GAEAPRCLIA RVDKNQLGKK SGQGFYHWTD GKAKKGAAAG VPAGLADRLV KPLIDRVEQL
VAAGVVADTE LADAGVIFGT GFAPFTGGPL NYRRVNR
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