Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1543 |
Symbol | |
ID | 3566155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1650219 |
End bp | 1650935 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637680011 |
Product | TetR family transcriptional regulator |
Protein accession | YP_284762 |
Protein GI | 71907175 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.176522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG TCCGCTCTGT AGATACTCGT GAACGCATCC TTGACGCTGC TGAACGGTTG TTCATGGCGC ACGGGTACGA AGGTACTTCG ATGCGCCAGA TCACCGGTGA GGCCGGCGTT AATCTAGCGG CGGTCAATTA CCACTTCGGC TCCAAGGAAT CGTTGATGCA GGAGGTCTTT CGTCGCCGCC TGGATTGGCT CAATGACGAG CGGATGCGTG TACTCAATGC CTATGAAAAA GAGGCCGCCG GCAAGCCATT GAAGCCATCG CAGATTGTCG ACGGGTTCTT CGGTACCTTA CTGCGTATGG CCGGCGACGA AGAGCGTGGT GGGGTTACTT TCCTGCGCCT GTTGGGGCGG ACCTTGACCG ATCCGTCGGA GTTCATCCGT ACCTTCCTGG CGCATGAATA CGCAGCGGTA GTCGATCGCT ACAAAGAGGC GTTGTTCAAA GCCTTGCCCG ATGTGCCGAA GGCGGAAATC GTCTGGCGCT TTCATTTCAT GCTCGGCGCC ACCTCTTACG CGATTGCCGG CACTGATGCC TTGCGCCTGG TGACCGATTG GCAGATTGAA GAAGCGGATT CGATTGACCG TCTGGATCGC CTGGTGCCTC GCCTGATGTC CTTCCTGCTC GGCGGGCTGC GTGCCCAGTT GCCGCAATTT TCGGATAGTG CTGCGACCAC TGACGCAAAT TCCGGCCCTG GGGTTGGCGG CAAATAA
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Protein sequence | MAEVRSVDTR ERILDAAERL FMAHGYEGTS MRQITGEAGV NLAAVNYHFG SKESLMQEVF RRRLDWLNDE RMRVLNAYEK EAAGKPLKPS QIVDGFFGTL LRMAGDEERG GVTFLRLLGR TLTDPSEFIR TFLAHEYAAV VDRYKEALFK ALPDVPKAEI VWRFHFMLGA TSYAIAGTDA LRLVTDWQIE EADSIDRLDR LVPRLMSFLL GGLRAQLPQF SDSAATTDAN SGPGVGGK
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