Gene Daro_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1543 
Symbol 
ID3566155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1650219 
End bp1650935 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content58% 
IMG OID637680011 
ProductTetR family transcriptional regulator 
Protein accessionYP_284762 
Protein GI71907175 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.176522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG TCCGCTCTGT AGATACTCGT GAACGCATCC TTGACGCTGC TGAACGGTTG 
TTCATGGCGC ACGGGTACGA AGGTACTTCG ATGCGCCAGA TCACCGGTGA GGCCGGCGTT
AATCTAGCGG CGGTCAATTA CCACTTCGGC TCCAAGGAAT CGTTGATGCA GGAGGTCTTT
CGTCGCCGCC TGGATTGGCT CAATGACGAG CGGATGCGTG TACTCAATGC CTATGAAAAA
GAGGCCGCCG GCAAGCCATT GAAGCCATCG CAGATTGTCG ACGGGTTCTT CGGTACCTTA
CTGCGTATGG CCGGCGACGA AGAGCGTGGT GGGGTTACTT TCCTGCGCCT GTTGGGGCGG
ACCTTGACCG ATCCGTCGGA GTTCATCCGT ACCTTCCTGG CGCATGAATA CGCAGCGGTA
GTCGATCGCT ACAAAGAGGC GTTGTTCAAA GCCTTGCCCG ATGTGCCGAA GGCGGAAATC
GTCTGGCGCT TTCATTTCAT GCTCGGCGCC ACCTCTTACG CGATTGCCGG CACTGATGCC
TTGCGCCTGG TGACCGATTG GCAGATTGAA GAAGCGGATT CGATTGACCG TCTGGATCGC
CTGGTGCCTC GCCTGATGTC CTTCCTGCTC GGCGGGCTGC GTGCCCAGTT GCCGCAATTT
TCGGATAGTG CTGCGACCAC TGACGCAAAT TCCGGCCCTG GGGTTGGCGG CAAATAA
 
Protein sequence
MAEVRSVDTR ERILDAAERL FMAHGYEGTS MRQITGEAGV NLAAVNYHFG SKESLMQEVF 
RRRLDWLNDE RMRVLNAYEK EAAGKPLKPS QIVDGFFGTL LRMAGDEERG GVTFLRLLGR
TLTDPSEFIR TFLAHEYAAV VDRYKEALFK ALPDVPKAEI VWRFHFMLGA TSYAIAGTDA
LRLVTDWQIE EADSIDRLDR LVPRLMSFLL GGLRAQLPQF SDSAATTDAN SGPGVGGK