| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1520 |
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| Symbol | |
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| ID | 3568625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1630305 |
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| End bp | 1630877 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637679988 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_284739 |
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| Protein GI | 71907152 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 74 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAA CTAATAGAGA AGAGGGTTTT CGGGCGAAGG AGGATCGTCT CAAGACCTTG
CTGATGCGCG GCTTGGCCGG TGAGAATGCC GCCTATCAAG TGTTCTTGAC CGAGCTGAGC
GCCCATCTGC GGGCGTTCCT GCGCAGACGT TTGATCCAAT TGCCTGATGA GGTGGAAGAC
TTGGTGCAAG AAGCACTCCT TGCCGTACAC AACCAGCGGC ACACTTATGA ACCCGGCCAG
CCATTGTCGG CCTGGGTGCA GGCTATCGCC CGCTACAAGC TGGTTGACCT GCTGCGTCGG
CGCGCTGTGC ATGAGACCCT TAACGATCCG CTGGATGAGG CGATGGAAGT CTTTTCAAGC
TCGGACACCG AGGCCGCAGA GGCTCGCCGT GACTTGAACA AGTTACTGGC CGACCTTCCC
GAGCAGCAAC GACTACCCAT TGTGCACACC AAACTGGAAG GATTGTCGGT GAAGGAAACA
GCCGACCTCA CCGGCATGTC GGAGTCAGCA ATCAAGGTTG GCGTTCATCG TGGCTTGAAA
GCACTCGCAC TAAAGATCAG AGGCATTTTG TGA
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| Protein sequence | MQRTNREEGF RAKEDRLKTL LMRGLAGENA AYQVFLTELS AHLRAFLRRR LIQLPDEVED
LVQEALLAVH NQRHTYEPGQ PLSAWVQAIA RYKLVDLLRR RAVHETLNDP LDEAMEVFSS
SDTEAAEARR DLNKLLADLP EQQRLPIVHT KLEGLSVKET ADLTGMSESA IKVGVHRGLK
ALALKIRGIL
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