| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1515 |
|---|
| Symbol | |
|---|
| ID | 3568967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1626509 |
|---|
| End bp | 1627723 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637679983 |
|---|
| Product | aminotransferase, class V:aromatic amino acid beta-eliminating lyase/threonine aldolase |
|---|
| Protein accession | YP_284734 |
|---|
| Protein GI | 71907147 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.894831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA AACCGATCTA CCTGGACAAC AACGCCACGA CGCGGGTCGA TCCTGCCGTG
GTCGAAACCA TGCTGCCGTT TTTCACGGAG CATTTCGGCA ACGCCTCGTC GATCCACGCC
TTCGGCAGCG AAGTCGGCAA GGCCTTGAAG AAGGCCCGCA GCCAGGTTCA GGCGCTGCTT
GGCGCCGAGC ACGACTCGGA AATCATCTTC ACCTCCTGCG GCACCGAGTC CGACTCGACC
GCCATCCTGT CGGCGCTCAA GGCGCAGCCG GACCGCAACA CGGTGATCAC CACCAACGTC
GAGCATCCGG CCATCCTGAC GCTGTGCGAG TGGCTGGAGA AGGAAGGCTA CATCGTCCAC
AAACTGAAGG TGGACAAGAA GGGCCGGATC GACATGGACG AGTACAAGTC CCTGTTGAAC
GACCGCGTCG CCGTCGTCTC GGCCATGTGG GCCAACAACG AGACGGGCAC CCTTTTCCCG
GTCGTCGAGA TGGCTGAACT GGCCTCGGCC AAGGGCATCA TGTTCCATAC CGACGCCGTG
CAGGCCGTCG GCAAGATTCC CATCGATCTG AAGAACACCA AGATCGACAT GCTCTCGCTG
TCCGGCCACA AGCTGCACGC GCCCAAAGGC ATCGGCGTGC TCTACCTGCG CCGCGGCTGC
CGCTTCCGTC CGCTGCTCCG TGGTGGTCAC CAGGAACGTG GTCGTCGTGC CGGCACCGAG
AACTCGGCAT CCATCGTCGG CCTCGGCATG GCCTGCGAAC TCGCGATGCA GAAAATGGAA
ACCGAGAACA CCACGGTCAA GCGCTTGCGC GACAAGCTGG AACAGGGCCT CCTGAGCCAG
ATCACGCACT GCTTCCCGAC TGGCGACGTG AGCAACCGCC TGCCCAATAC CAGCAACATC
GCGTTCGAGT ATATCGAGGG TGAGGCTATC CTGCTGCTGT TGAACAAGCT GGGCATCGCG
GCCAGTTCGG GCTCGGCCTG TACCTCCGGC TCACTCGAAC CGTCGCATGT GATGCGCGCC
ATGGGCATTC CCTACACCGC CGCCCACGGC ACGATCCGCT TCTCGCTGTC GGTCTACAAC
ACCGAAGCCG AAATCGATCG CGTCATCGCA GCGGTGCCGC CAATCATCGC CCAACTGCGC
AAGCTTTCAC CATACTGGAC CGACAAGGGC CCGGCCGCCA ATCCCGAAGC CGCCTTCGCC
CCGACTTACG CCTGA
|
|---|
| Protein sequence | MELKPIYLDN NATTRVDPAV VETMLPFFTE HFGNASSIHA FGSEVGKALK KARSQVQALL
GAEHDSEIIF TSCGTESDST AILSALKAQP DRNTVITTNV EHPAILTLCE WLEKEGYIVH
KLKVDKKGRI DMDEYKSLLN DRVAVVSAMW ANNETGTLFP VVEMAELASA KGIMFHTDAV
QAVGKIPIDL KNTKIDMLSL SGHKLHAPKG IGVLYLRRGC RFRPLLRGGH QERGRRAGTE
NSASIVGLGM ACELAMQKME TENTTVKRLR DKLEQGLLSQ ITHCFPTGDV SNRLPNTSNI
AFEYIEGEAI LLLLNKLGIA ASSGSACTSG SLEPSHVMRA MGIPYTAAHG TIRFSLSVYN
TEAEIDRVIA AVPPIIAQLR KLSPYWTDKG PAANPEAAFA PTYA
|
|---|
| |