| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1502 |
|---|
| Symbol | |
|---|
| ID | 3568954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1618904 |
|---|
| End bp | 1619581 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637679970 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_284721 |
|---|
| Protein GI | 71907134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TCGCCCGTTC GGAATCGCGC GGTATCAAAC CCCTCTCTGC TGCAGTAGCG
CTGTTTGGTG CGGCATTGTT TGCACCCAAT GTCGCACTGG CCCTGCCATT GATTAACGGT
GATTTTGAGA ATACATCCCT GGCTGGCAAT CCGGCTTATT ACACACTGGC AGCCGGCTCG
ACTGCCATCA CGGGTTGGAC CGTTGGTGGT CAGGGCATCG ATTACATCAA GAACTATTGG
CAAGATGCCA GTGGGAACTT CAGCCTGGAC CTCTCGGGAA CCGGCAGCGG ATCCATTTCG
CAGGCGTTTG ACACCTTGGC TGGCCACACG TATCAGGTCA CTTTTGCCAT GGCCGGCAAT
CCGGATGACA TGACCGGACC TGAACTGGTC AAGCAACTCC GTGCCGTAGC GGCCAACTTT
AACGATGTCT TTCAATTCCA TCACGACACC AGCAGCAATT CCAGGACAAA CATGGGGTGG
ATTGAGCAAA GCTTTTCATT TACGGCGTTG GCAAATCAAA CGACCCTGAG CTTCGAAAGC
ATGGAGAGCA GTGCTTATGG TCCCGCTCTC GACAATGTTC GTGTTGCTGA CATAACCCGT
GTCCCTGAGC CAGGCACATT TGCCCTCATG GGTCTCGGGT TGGCCGGCCT CGGACTGAAG
CGTCGCAAAA AGGCATAA
|
|---|
| Protein sequence | MKLIARSESR GIKPLSAAVA LFGAALFAPN VALALPLING DFENTSLAGN PAYYTLAAGS
TAITGWTVGG QGIDYIKNYW QDASGNFSLD LSGTGSGSIS QAFDTLAGHT YQVTFAMAGN
PDDMTGPELV KQLRAVAANF NDVFQFHHDT SSNSRTNMGW IEQSFSFTAL ANQTTLSFES
MESSAYGPAL DNVRVADITR VPEPGTFALM GLGLAGLGLK RRKKA
|
|---|
| |