| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1501 |
|---|
| Symbol | |
|---|
| ID | 3568953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1617197 |
|---|
| End bp | 1618597 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637679969 |
|---|
| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
|---|
| Protein accession | YP_284720 |
|---|
| Protein GI | 71907133 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA GCGAAATCCA GGCCCTGCTC GACGAGCCGG CCTGTAGCCA CAACAAGAAG
GAAAAGTCCG GCTGCGCCAA GCCCAAGCCT GGCGCCACGG CGGGCGGCTG TTCCTTCGAC
GGCGCGCAGA TCGCGCTGCT GCCGATTGCC GATGTTGCCC ATATCGTCCA TGGACCGATT
GCCTGTGCCG GTTCCTCCTG GGACAACCGC GGAACGCGCT CTTCCGGCGT CACGCTGTAC
AAGATCGGCA TGACCACCGA TCTGTCGGAA ACCGATGTGG TGATGGGCCG TGGCGAGAAG
CGGCTATTTC ATGCCATCAA GCAGGCGATC GACAGCTATT CGCCCTCGGC CGTCTTCATC
TACAACACTT GCGTCACGGC GCTGATCGGT GACGATGTCG GCGCCGTCTG CAAGGCGGCC
ACCGAACGCT GGGGGACGCC GGTTGTGCCG GTCGATGCGG CCGGTTTCTA CGGCACCAAG
AACCTCGGCA ATCGGCTGGC TGGCGAGGCG ATGTTCAAGC ATGTGATCGG TACCGCCGAG
CCTGCCCCTG CCGCACCGCG CGCCGACGGC CTGCCAACCT ACGACGTCAA TTTGATCGGC
GAATACAACA TCGCCGGTGA GTTCTGGCAT GTCGCACCGC TATTTGATGA ACTTGGCCTG
CGCATTCTTT GCACACTGTC CGGAGACTCG CGTTTCCATG AGGTGCAGAC CATGCACCGC
GCCAGGGTGA ACATGGTCGT CTGTGCCAAG GCATTGCTCA ACGTGGCACG CAAGATGGAA
GACAACTTCG GCATTCCCTT CTTCGAGGGT AGCTTCTACG GCGTGCAGGA TGTCTCCAAT
GCCTTGCGCG ATTTCGCCCG GCTGATCGGC GACCCGGATT TGACGGCGCG TACCGAGGCG
GTGATTGCCC GCGAGGAAGC CAAGTCGCAT GCCGCGCTGG AACCCTGGCG TGATCGCCTG
CGCGGCAAGC GGGTGCTGCT CTACACCGGC GGCGTCAAGT CGTGGTCCAT CGTCTCGGCC
TTGCAGGATC TGGGCATGAA GGTGGTAGCG ACCGGCACCA AGAAATCGAC CGAAGAGGAC
AAGGCGCGCA TCCGCGAGTT GATGGGTGAC GATACCAAGA TGATCGACGA CGGCAGCCCA
AAGGCCTTGC TCTCGACTTA CCACGAGTAC AAGGCCGACA TCCTGATCGC CGGTGGCCGC
AACCTCTACA CCGCCTTGAA GGCGCGCATT CCTTTCCTCG ACATCAATCA GGAACGCGAA
TTCGGCTACG CCGGCTACGA CGGCATGGTC GAACTGGCCC GCCAGCTGGC GCTATCGATG
GAAAGTCCGG TCTGGGCCGC CGTGCGCAAG CCAGCGCCGT GGGCGGCGCA AAAGGGGCCC
GGAACGGTGG TCGTGGCCTG A
|
|---|
| Protein sequence | MKASEIQALL DEPACSHNKK EKSGCAKPKP GATAGGCSFD GAQIALLPIA DVAHIVHGPI
ACAGSSWDNR GTRSSGVTLY KIGMTTDLSE TDVVMGRGEK RLFHAIKQAI DSYSPSAVFI
YNTCVTALIG DDVGAVCKAA TERWGTPVVP VDAAGFYGTK NLGNRLAGEA MFKHVIGTAE
PAPAAPRADG LPTYDVNLIG EYNIAGEFWH VAPLFDELGL RILCTLSGDS RFHEVQTMHR
ARVNMVVCAK ALLNVARKME DNFGIPFFEG SFYGVQDVSN ALRDFARLIG DPDLTARTEA
VIAREEAKSH AALEPWRDRL RGKRVLLYTG GVKSWSIVSA LQDLGMKVVA TGTKKSTEED
KARIRELMGD DTKMIDDGSP KALLSTYHEY KADILIAGGR NLYTALKARI PFLDINQERE
FGYAGYDGMV ELARQLALSM ESPVWAAVRK PAPWAAQKGP GTVVVA
|
|---|
| |