Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1491 |
Symbol | |
ID | 3569001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1608264 |
End bp | 1608806 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637679959 |
Product | positive regulator of sigma(E), RseC/MucC |
Protein accession | YP_284710 |
Protein GI | 71907123 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.392689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATGA GCCACGACGC CCTGAATCCT TCGCCAGCCA GCCTGAGCTT CTCGACCCAG TCGGTCGAGG GCATCGCCCG GGTGGTGCGC GTCACCGGCG ATCAGGTCTG GCTCGAGCCG GAACAGACCA CCAGTTGCGG CCACTGTGCC TCGAGCGCCA GTTGCGGTGC CAGTGCCCGT GAAGCAGCGG GAATCGGCAC CGTGACCAGC CGCCTGCAGG CGCGCCGCTT CATGCTCGAC AACCCGGAAG GTTCGTCCGG GTTTCACGAA GGCGAACGGG TGGTCGTCGG CGTCAGCGAA CGGGCGCTGC TCAGTGCTTC GCTGACGGCC TACGGCGTGC CACTGCTGTT TGCCCTCACG GCCGGCTCGG TGATCCAGGC GGTCTACGGT GAAGATTTGA CCACGATGCT CGGCATGGCT GGCGGGTTGT TCCTCGGCCT GCTCGTGGCC CGGCTCAATG CGCGTCGCCT GGCGGCACGG GGCGACCTTG CCCCACGCTT CCTGCGCCGG GCAAGGCCTG ATGAAACCTG CGGAACTGAC TAG
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Protein sequence | MIMSHDALNP SPASLSFSTQ SVEGIARVVR VTGDQVWLEP EQTTSCGHCA SSASCGASAR EAAGIGTVTS RLQARRFMLD NPEGSSGFHE GERVVVGVSE RALLSASLTA YGVPLLFALT AGSVIQAVYG EDLTTMLGMA GGLFLGLLVA RLNARRLAAR GDLAPRFLRR ARPDETCGTD
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