Gene Daro_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1491 
Symbol 
ID3569001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1608264 
End bp1608806 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID637679959 
Productpositive regulator of sigma(E), RseC/MucC 
Protein accessionYP_284710 
Protein GI71907123 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.392689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATGA GCCACGACGC CCTGAATCCT TCGCCAGCCA GCCTGAGCTT CTCGACCCAG 
TCGGTCGAGG GCATCGCCCG GGTGGTGCGC GTCACCGGCG ATCAGGTCTG GCTCGAGCCG
GAACAGACCA CCAGTTGCGG CCACTGTGCC TCGAGCGCCA GTTGCGGTGC CAGTGCCCGT
GAAGCAGCGG GAATCGGCAC CGTGACCAGC CGCCTGCAGG CGCGCCGCTT CATGCTCGAC
AACCCGGAAG GTTCGTCCGG GTTTCACGAA GGCGAACGGG TGGTCGTCGG CGTCAGCGAA
CGGGCGCTGC TCAGTGCTTC GCTGACGGCC TACGGCGTGC CACTGCTGTT TGCCCTCACG
GCCGGCTCGG TGATCCAGGC GGTCTACGGT GAAGATTTGA CCACGATGCT CGGCATGGCT
GGCGGGTTGT TCCTCGGCCT GCTCGTGGCC CGGCTCAATG CGCGTCGCCT GGCGGCACGG
GGCGACCTTG CCCCACGCTT CCTGCGCCGG GCAAGGCCTG ATGAAACCTG CGGAACTGAC
TAG
 
Protein sequence
MIMSHDALNP SPASLSFSTQ SVEGIARVVR VTGDQVWLEP EQTTSCGHCA SSASCGASAR 
EAAGIGTVTS RLQARRFMLD NPEGSSGFHE GERVVVGVSE RALLSASLTA YGVPLLFALT
AGSVIQAVYG EDLTTMLGMA GGLFLGLLVA RLNARRLAAR GDLAPRFLRR ARPDETCGTD