| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1490 |
|---|
| Symbol | |
|---|
| ID | 3569000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1607593 |
|---|
| End bp | 1608267 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637679958 |
|---|
| Product | electron transport complex RsxE subunit |
|---|
| Protein accession | YP_284709 |
|---|
| Protein GI | 71907122 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
|---|
| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.574816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA GCGACTACAA GACGATCGTC AAGGACGGTC TGTGGGACAA CAACGGCGTG
TTCAGCATGC TGCTTGGCAT GTGTCCCTGC ATGGCGATGA CCACCAGCGC CACCAACGGC
TTCGGCATGG GGCTGGCGAC GGCGGTGGTG ATGGCCGCCT CGAGCTACCT GGTGGCCGTG
TTCCGCAACC GGATCACGAC GGAAGTGCGG ATCCCGGTGT ATATCCTGAT CGTTGCCGCC
ATGGTGACGG TGGTCGATCT GGGCATGAAC GCCTGGATGC ATGAGTTGTA CAAGGTGCTC
GGCCTGTTCA TCCCGCTGAT CGTCTCAAAC TGCCTGCCGC TGGCCCGGCT TGAAGCCTTC
GCCGCCAAGC AGTCGCCGAC GCCTGCCTTC CTGGATGGCT TGTTCATGGG CCTGGGTTTC
ACGATTGCCC TGACGGCGAT CGGCGCCGTT CGCGAAATCA TTGGCTCCGG CACCTTGTTT
GCCGATGCCT CGCTGCTGCT CGGGCCAAGC TTCAAGGCGA TCGAGATGCG CCTGCTGCCG
GCGGACATGG GCGTCCTGAT GATGATCCTG CCGCCGGGTG GCTTCATCGT CACCGGTCTG
CTCGTCGTCG GCAAGCGCCT GATGGATCTG GCTGCCGGCA AGGAAATCCA GATGGCCGGT
GCGCACGCCC TGTGA
|
|---|
| Protein sequence | MANSDYKTIV KDGLWDNNGV FSMLLGMCPC MAMTTSATNG FGMGLATAVV MAASSYLVAV
FRNRITTEVR IPVYILIVAA MVTVVDLGMN AWMHELYKVL GLFIPLIVSN CLPLARLEAF
AAKQSPTPAF LDGLFMGLGF TIALTAIGAV REIIGSGTLF ADASLLLGPS FKAIEMRLLP
ADMGVLMMIL PPGGFIVTGL LVVGKRLMDL AAGKEIQMAG AHAL
|
|---|
| |