Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1443 |
Symbol | |
ID | 3569050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1569433 |
End bp | 1570695 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637679911 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_284662 |
Protein GI | 71907075 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC GTCGCAACTT CATCAAGGCA ACCGTTCTCG CCGCCGCCCT GTCGTCCATC GGCATGGCCG CCCACGCCGC CGATACCATC AAGGTCGGCG TACTGCACTC CCTGTCCGGC ACCATGGCGA TTTCCGAGAC CGCGCTCAAG GAAACCGTGC TGATGACCAT CGAGGAAATC AACAAGTCCG GCGGCGTACT CGGCAAGAAG CTCGAGCCGG TCGTCGTCGA TCCGGCTTCC AACTGGCCGC TGTTCGCCGA AAAGGCCCGC CAGCTGCTGA CCAAGGACAA GGTTGCCGTC ACCTTTGGTT GCTGGACTTC GGTGTCCCGC AAGTCTGTGC TGCCGGTCTA CAAGGAACTG AACGGCCTGC TCTTCTACCC GGTTCAGTAC GAGGGCGAAG AACTGGAAAA AAACGTCTTC TACACCGGCG CTGCGCCCAA CCAGCAGGCC ATTCCGGCCG TCGAATACTT GATGAGTAAG GATGGCGGCG AAGCCAAGCG ATTCGTGCTG CTCGGCACCG ACTATGTCTA TCCGCGTACC ACCAACAAGA TTCTGCGCGC CTTCCTGAAG TCCAAAGGCG TGGCCGACGC CGACATCATG GAAGACTACA CGCCGTTCGG CCACAGCGAT TACCAGACCA TCATCGCCAA GATCAAGAAG TTCGCTTCCG AAGGCAAGAA GACCGCCGTC GTCTCGACCA TCAACGGCGA TTCCAACGTG CCGTTCTACA AGGAACTGGG CAATGCCGGC CTGAAGGCCA CCGATGTGCC GGTTGTCGCC TTCTCGGTCG GTGAAGAAGA GCTGCGCGGT GTCGATACCA AGCCGCTGGT TGGCCACCTG GCTTCGTGGA ACTACTTCAT GTCGCTGAAG AATCCGGAAA ACGACAAGTT CGTGAAGATG TACCGCGAAT GGGCCAAGAA GGCCAAGCTG CCAAATGCCG ACAAGGTCGT GACGAATGAC CCGATGGAAG CTACCTACAT CGGCATCCAC ATGTGGAAGC AGGCTGTCGA GAAGGCCAAG TCCACCGACA CCGACAAGGT TATCGCCGCC ATGGCCGGCC AGACCTTCAA GGCACCGAGC GGCATCCTGT CGAAGATGGA CGAGAAGAAC CACCACCTGC ACAAGTCGGT GTTCATCGGC GAAGTGAAGG CCGATGGCCA GTTCAATGTC GTCTGGAAGA CGCCCGGCCC GGTCAAGGCC CAGCCGTGGA GCCCGTACAT CGCCGGCAAT GACAAGAAGA AGGACGAGCC GGAAGCGAAG TGA
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Protein sequence | MSNRRNFIKA TVLAAALSSI GMAAHAADTI KVGVLHSLSG TMAISETALK ETVLMTIEEI NKSGGVLGKK LEPVVVDPAS NWPLFAEKAR QLLTKDKVAV TFGCWTSVSR KSVLPVYKEL NGLLFYPVQY EGEELEKNVF YTGAAPNQQA IPAVEYLMSK DGGEAKRFVL LGTDYVYPRT TNKILRAFLK SKGVADADIM EDYTPFGHSD YQTIIAKIKK FASEGKKTAV VSTINGDSNV PFYKELGNAG LKATDVPVVA FSVGEEELRG VDTKPLVGHL ASWNYFMSLK NPENDKFVKM YREWAKKAKL PNADKVVTND PMEATYIGIH MWKQAVEKAK STDTDKVIAA MAGQTFKAPS GILSKMDEKN HHLHKSVFIG EVKADGQFNV VWKTPGPVKA QPWSPYIAGN DKKKDEPEAK
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