Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1441 |
Symbol | |
ID | 3569048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1566315 |
End bp | 1568699 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637679909 |
Product | PAS |
Protein accession | YP_284660 |
Protein GI | 71907073 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.876573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGGC TTGGCTTGAT CTCGCGTATC GCATTTCTGG TTATTGGTGT CGAAGTTGCT GCCTTTGGTG TGCTTGGAGC GTTCTATATT GATCGCTTCA ATACAGCCCT GGACACGAAC ATCCATTCGC GTCTTAGCCT TGTCGGCCAA ATGATCGCTG GAGACGAACT GGCAGTAAGT GCCATTTCGC GTGTTTCATT TATGAGCGAA CTGCTGGGTG CGCCCTATTT GAAGGGAATA GTTGTTGGGG GCAACGGGCG GGTCATCGTA TCTACCGATG CCTCTCAACT TGGCCAGGAG GCCAGGAATG TTTCGGATAT CGATCCCCGA TGGCTGGATG CTTCAGCCGC TGATGAGCAG TTCGTGATCG GTCCGGACAG CCTATGCAGC ATCAGGCACA TACACGGCGC TGCGAATGGA GCCCCCCCCC TCTACATAAC GATAATCACG ATCAGTACGG CTGCACTGAA TGCACAGAAA CGCTCCGTAG CCCTCTGGGG TCAAATCGGT TCGTTGCTTT TTATATTGCT CAGTTCGGCT GCCATCGTGC TGATCGCTCA ACACCTCATT ACTCGTCGCG TCAAGCTGTC ACTCGATGTC CTGAAAAAAG TCGAGGATGG CGCGATCGAT GCCCGGATTC CGGTTTCCCT GGAAGATGAA CTTGGGCAGC TGCAGCGCGG CATCAATTCG ATGACCGCCA AGTTGGGTGA GTTGCTGCGA CAGCATCGAG GAAATGCCGA TGAACTGAAG AAGCAGAAAG AGCTCCTTCA GTCCGTCATT GAGCACACTC CGCTTCGCGT ATTCTGGAAA GACAAGGACT GTCGATATCT GGGCTGCAAC AGCCTGTTTG CCCTCGACGC CGGCTTGACC TCACCTGATG AGTTGATTGG CAAGTCCGAT TTCGAATTGA GCTGGCGTGA GCAGGCAGAG CTCTACCGGG CCGACGACCA GGCGGTGATG GTTTCTGGCG TCCCGAAAAT TGACTTTGAG GAACCACAAA CCACGCCAGA CGGCCATACC ATCTGGCTGA GCACCTCAAA GGTTCCGCTG CACACCGGGG ATGATGAAGT AATCGGTGTT CTTGGCATTT ATACCGACAT TACGGAGCGC AAGAATACCG CTCAGGAATT GGCAAAGCAC CGACTCCATC TGGAGCAACT GGTCGAAGAA CGGACCGAGG AACTCTTGCT GGCCAAAGAC GCCGCCGAAA ACGCGAATAT GGCGAAGAGT GCCTTCCTTG CCAACATGAG CCATGAAATA CGAACTCCCT TGAATGCCAT TGCCGGCATG GCTCATTTCA TCCGACGCGG CGGGTTGTCA CCAAAACAGT CCGAGCAACT CGAAAAACTC GAAGGCGCCA GCACCCATCT CCTGAACATC ATCAACGCGA TTCTGGAGCT TTCCAAGATT GAAGCCGGCA AATTCGAGAT CGAAGAATCT CCGATCAAGG TGGAAAGTAT CCTGGGCAAC GTGCTTTCAT TGCTGCACGA TAGAGCAGAG GCCAAGCACA TCAAACTGCT CTGCGAAATC GAATTGCTGC CGAAAGACCT GTTGGGCGAC GCTACGCGTT TGCAGCAGGC CTTGCTCAAT TACACCACCA ATGCGGTCAA ATTCACGGAA ACGGGTAGCG TTACCCTGCG TGTCCATCCA GTTGATGAGA ATGCAATTAG CACCGTTTTG CGTTTCGAGG TCCGGGATAC GGGCATAGGC ATCGCGCCCG AGGTACTGCC AAAACTGTTC TCTGCCTTCG AACAGGCTGA CAACAGCACC ACGCGAAAAT ATGGCGGTAC AGGCTTGGGG CTGGCTATCA CGAAAAAGCT GGCCGAGATG ATGGGGGGCG ACTCGGGTGC TGAAAGCACG TTAGGACGAG GTAGTACGTT CTGGTTCACG GTCAGGCTCA GGAAAGGCCC GGCTCAGGTT GCCGAAACCC AGTTCTCACC AGTCACCGAT GCCGAGATGC AGCTCAAGAC GAATTTTGCC GGGCGCCGGA TATTGCTGGC GGAGGACGAG CCGATCAATC GAGAGATCAC TCTTTCGTTG TTAGAGGACG TGGGTTTGAC GGTAGATATT GCTGAAGATG GCATCGAGGC GCTCAAATTG GCAGGCGCCA ATAACTATGC ACTGGTCCTG ATGGACATGC AGATGCCAGG TATGGATGGC CTTGAGGCGA CGAGAAGCAT TCGCCGTCTG CCGGTATCTG GCGATGTACT CATCCTCGCC ATGACGGCCA ACGCGTTTGT TGAAGACAAA CAGCGATGCC TCGATGCGGG AATGAACGAC TTTATTTCCA AGCCGGTCGA TCCCAAACTG CTGTTCAATA AGCTCTTGAA ATGGCTCAGT CAGGGCTCAC CGCGCAGGGA AGATACCCAA CTATCCGTCA ACTGA
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Protein sequence | MFRLGLISRI AFLVIGVEVA AFGVLGAFYI DRFNTALDTN IHSRLSLVGQ MIAGDELAVS AISRVSFMSE LLGAPYLKGI VVGGNGRVIV STDASQLGQE ARNVSDIDPR WLDASAADEQ FVIGPDSLCS IRHIHGAANG APPLYITIIT ISTAALNAQK RSVALWGQIG SLLFILLSSA AIVLIAQHLI TRRVKLSLDV LKKVEDGAID ARIPVSLEDE LGQLQRGINS MTAKLGELLR QHRGNADELK KQKELLQSVI EHTPLRVFWK DKDCRYLGCN SLFALDAGLT SPDELIGKSD FELSWREQAE LYRADDQAVM VSGVPKIDFE EPQTTPDGHT IWLSTSKVPL HTGDDEVIGV LGIYTDITER KNTAQELAKH RLHLEQLVEE RTEELLLAKD AAENANMAKS AFLANMSHEI RTPLNAIAGM AHFIRRGGLS PKQSEQLEKL EGASTHLLNI INAILELSKI EAGKFEIEES PIKVESILGN VLSLLHDRAE AKHIKLLCEI ELLPKDLLGD ATRLQQALLN YTTNAVKFTE TGSVTLRVHP VDENAISTVL RFEVRDTGIG IAPEVLPKLF SAFEQADNST TRKYGGTGLG LAITKKLAEM MGGDSGAEST LGRGSTFWFT VRLRKGPAQV AETQFSPVTD AEMQLKTNFA GRRILLAEDE PINREITLSL LEDVGLTVDI AEDGIEALKL AGANNYALVL MDMQMPGMDG LEATRSIRRL PVSGDVLILA MTANAFVEDK QRCLDAGMND FISKPVDPKL LFNKLLKWLS QGSPRREDTQ LSVN
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