| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1437 |
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| Symbol | |
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| ID | 3569083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1562296 |
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| End bp | 1563873 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637679905 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_284656 |
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| Protein GI | 71907069 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CTTTAATTGC TTTATTGCTC AGCCTCGGCA GCCTGTCGGC GCAAGCGGCG
CTCGACCCGG CGCAGGTGCG CCAGCTGGCC GCCGAGGACT CCAGCGACAA GGTGGCGGCC
ATCCGCCAAC TGACGCAAAC CGCCGACCCG GATGCCGTGC GCGTCCTCAA GGCGATGGCC
GACGACAGCC TGTTTCTGGC CGGCGACAAG GTCGTCATCA TCGATGGCGA CAAGGCCTTC
GACGGCGCGA CCGGCGAAGC GCTCAAGATG CCGGCCAACC CCGAGTCGCC GACGGTCAAT
AACCGCATCC GCGGCGAACT GGCCAGCGCG CTGGCCGCGC TGAAGTTGTT CGATGCCGAT
GCCACGGTCC GCCTCGCCTC GGCCCAGAAG CTGCAAAGCC AGGTGACACC GGAAATGGGG
CCGCTGCTGG CGCGGGCGCT GGAAAAGGAA ACCGACGCCC AGATCAAGGC TCTGCTCACC
CTCGCTTACG CCCAGGCCAA TCTCGGCAAC GCCGACTCGG CCGCCCGCCT GGCCGCCGTC
AAGGCGCTAG CCGAAACCTC CTCGCCCACC ATCAAGAGCG TCCTGCTGCC GCTGACCGAA
AAGGCTGGCG AGCCGGACGA CAAGGTGCGC TACGAAGCGA TCGCCGCGTT GAAGGCGATC
GACGGCCGGC TGGCCATTGC AGAAAACGTC GGCCGCGCCT TTTCCGGTCT GTCGCTCGGC
AGCATCCTGC TCCTCGGCGC GCTCGGCCTA GCCATTACCT ACGGCGTCAT GGGCATTATC
AACATGGCGC ACGGCGAGCT GCTGATGGTC GGCGCCTACG CCACCTACGG CATGCAGACG
CTGTTCCGCG CCTACTTCCC GGACGCCATC GACTGGTATC TGCCGGCGGC CATCCCGGTC
GCCTTCTTCG CCGCCGCGCT GGTCGGCGTC GTCATGGAAC GCACGGTCAT CCGCTGGCTC
TACGGCCGCA CGCTGGAAAC CCTGCTCGCC ACCTGGGGCC TGTCGCTGGT CCTGATCCAG
TCGGCGCGCG TGCTGTTCGG CGCACAGAAC GTCGAAGTCT CGAACCCGAG CTGGATGTCG
GGCGGTATCG AAATCATGCC CAACCTGATC CTGCCGTGGA ACCGCATCAT CATTGTCGGC
TTTGCGATGT TCGTGCTCTT CCTTGTCTGG GTGCTGATGA ACAAGACCCG GCTCGGCATG
TTCGTCCGCG CCGTGACGCA AAACCGCCCG ATGGCGGGTT GTGTCGGCGT ACCGACCTCA
CGCATCGACA CCATGGCCTT CGCGCTGGGC GCCGGCATCG CCGGGCTGGG CGGCGTCGCG
CTCTCCCAAA TCTCCAACGT CGGGCCGGAC ATGGGCCAGG GCTACATCGT CGATTCCTTC
ATGGTCGTCG TCGTCGGCGG CGTCGGGCAA CTCGCCGGTG CGGTCTGGGC GGCGCTCGGT
CTGGGCATCT TCTCAAAACT GCTCGAAGGC TGGGCCGGGG CGGTCATCGC CAAGATCAGC
ATCCTCGTCT GCATCATCAT CTTCATCCAG AAGCGCCCGC AGGGCATCTT CGCCCTCAAG
GGCCGCTTCG TCGAGTAA
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| Protein sequence | MKKTLIALLL SLGSLSAQAA LDPAQVRQLA AEDSSDKVAA IRQLTQTADP DAVRVLKAMA
DDSLFLAGDK VVIIDGDKAF DGATGEALKM PANPESPTVN NRIRGELASA LAALKLFDAD
ATVRLASAQK LQSQVTPEMG PLLARALEKE TDAQIKALLT LAYAQANLGN ADSAARLAAV
KALAETSSPT IKSVLLPLTE KAGEPDDKVR YEAIAALKAI DGRLAIAENV GRAFSGLSLG
SILLLGALGL AITYGVMGII NMAHGELLMV GAYATYGMQT LFRAYFPDAI DWYLPAAIPV
AFFAAALVGV VMERTVIRWL YGRTLETLLA TWGLSLVLIQ SARVLFGAQN VEVSNPSWMS
GGIEIMPNLI LPWNRIIIVG FAMFVLFLVW VLMNKTRLGM FVRAVTQNRP MAGCVGVPTS
RIDTMAFALG AGIAGLGGVA LSQISNVGPD MGQGYIVDSF MVVVVGGVGQ LAGAVWAALG
LGIFSKLLEG WAGAVIAKIS ILVCIIIFIQ KRPQGIFALK GRFVE
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