| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1405 |
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| Symbol | |
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| ID | 3569090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1536142 |
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| End bp | 1537341 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637679873 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_284624 |
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| Protein GI | 71907037 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.00694073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0323168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGT TTCCCCTCTT TGCGGCCTTC CTGGTCGCGA TTGCTTTTTT GTTTCTACTG
CCCCCCTTGT TGCGTCAGCC GCGTATTGCA GCAGAGGCCG CTAGCCGCAA GGTGTCAAAT
GTGGCGATAT TTCGCACGCA TCTTGCTGAG CTGGAACTTG AAAAGCAGGG GGGCGAATTG
AGTGAGGAGG CTTATGAGCA GGCCCATCGC GAGCTGCGGC GTCGACTGCT GGATGAGGTA
GGTGATGCTC CGGCTGGCGC ACAATCTCCT CAGCTTGGCG GCCCGAGCCG CAAGATGGCG
CTCGTCGTGG CGCTCCTGCT GCCACTCGGC GCGGTGGCTG GCTATTGGAT TTTGGGCAAC
ACGCGCGCCC TGGATCCGGT TGCCGCCATG CAGCCGGAAA AACTGACGCC GGAGCAGATC
GCGGGTATGG TCGGCAAGCT GGCCCAACGC CTGGAGGACA ATCCGGGCGA CGCAGAGGGC
TGGCTGATGC TGGCCCGTTC TTACCGATCA ATGGGTCAGA CGGAAAAAGC CGCAGATGCT
TACAGTAAAG CCGGTGCGGT CGTCTTTGAG AGCCCGGATT TGCTGACCGA TTACGCAGAC
CTGCTGGCGA TGCTCAATGG CGGCAGTCTG AATGGCAAGC CGATGGAGCT GATCAACAAG
GCCTTGCATC TCGATCCGGA CCACGTGGTT GCGCTGTGGC TGGCAGGTAC GGCGGCGTTC
AATGGCAAGG ACTTTTCGAC TGCCGTGATT TTCTGGGAGC GAGCGCTCAA GACGCTTCAG
CCGGATTCAG AGGATGCCAA AATGCTGTCT GAAGGCGTTG CCGAAGCGAA GAAACGAGCT
GGCTTCAAGG CAGATCCGAA AAAATCGGTG AGCGGTCGGG TTGCGCTCTC TCCAGCCCTT
GGCGCCAGGA TTTCTCCGGA CGATACTGTG TTTATTTTTG CCAGAGCCAC GGATGGCTCC
CGGATGCCGA TTGCGATTTC CAGAATTCGT GTTTCAGATT TGCCGTTTGA TTTTGTGCTG
GACGACAGTT CTGCCATGAG CGCCGAAAAC ATTCTGTCGA AACAGACCAG GGTGCTAGTC
CAGGCCAGGG TTTCAAAAAC TGGCAATGCC GTACCCACAG CCGGCGATCT GGAAAGCGAA
GCGCAAACGG CAAAGATTGG ACAAGGTGGG CTCAACATCG TTATTGACCG TGTGCACTAG
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| Protein sequence | MTWFPLFAAF LVAIAFLFLL PPLLRQPRIA AEAASRKVSN VAIFRTHLAE LELEKQGGEL
SEEAYEQAHR ELRRRLLDEV GDAPAGAQSP QLGGPSRKMA LVVALLLPLG AVAGYWILGN
TRALDPVAAM QPEKLTPEQI AGMVGKLAQR LEDNPGDAEG WLMLARSYRS MGQTEKAADA
YSKAGAVVFE SPDLLTDYAD LLAMLNGGSL NGKPMELINK ALHLDPDHVV ALWLAGTAAF
NGKDFSTAVI FWERALKTLQ PDSEDAKMLS EGVAEAKKRA GFKADPKKSV SGRVALSPAL
GARISPDDTV FIFARATDGS RMPIAISRIR VSDLPFDFVL DDSSAMSAEN ILSKQTRVLV
QARVSKTGNA VPTAGDLESE AQTAKIGQGG LNIVIDRVH
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